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L1_008_000G1_scaffold_563

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Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_563_1
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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584..1039
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VSA3_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN87607.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L1_008_000G1_scaffold_563_2
Serratia plymuthica, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1127..1714
DNA (588bp) protein (196aa)
Major fimbrial subunit n=1 Tax=Serratia plymuthica PRI-2C RepID=I3AQ36_SERPL
Major fimbrial subunit {ECO:0000313|EMBL:EIJ21229.1}; TaxID=1154756 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia plymuthica PRI-2C.;"
fimA; fimbrial protein FimA
L1_008_000G1_scaffold_563_3
Serratia sp. Ag1, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1778..2368
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Pseudomonas nitroreducens RepID=UPI00031B1E8B
Fimbrial protein {ECO:0000313|EMBL:KFL00501.1}; TaxID=1524467 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia sp. Ag1.;"
major fimbrial subunit
L1_008_000G1_scaffold_563_4
Serratia sp. DD3, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2433..3005
DNA (573bp) protein (191aa)
Fimbrial protein n=1 Tax=Shewanella sp. (strain W3-18-1) RepID=A1RPW8_SHESW
fimbrial protein
S-fimbrial protein subunit SfaA {ECO:0000313|EMBL:KEY56959.1}; TaxID=1410619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia sp. DD3.;"
L1_008_000G1_scaffold_563_5
Gallibacterium genomosp. 2, Gallibacterium, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3071..3637
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4SZL1_YERIN
Fimbrial protein {ECO:0000313|EMBL:KGQ32277.1}; TaxID=155517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Gallibacterium.;" source="Gallibacterium genomosp. 2.;"
fimbrial protein
L1_008_000G1_scaffold_563_6
Ewingella americana, Ewingella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3822..4403
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Serratia sp. DD3 RepID=V5CEP7_9ENTR
aef1A; fimbrial protein
Putative fimbrial protein {ECO:0000313|EMBL:KFC83247.1}; TaxID=910964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Ewingella.;" source="Ewingella americana ATCC 33852.;"
L1_008_000G1_scaffold_563_7
Enterobacteriaceae bacterium bta3-1, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4450..5169
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4T238_YERIN
P pilus assembly protein, chaperone PapD {ECO:0000313|EMBL:AJQ99110.1}; TaxID=1265478 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae.;" source="Enterobacteriaceae bacterium bta3-1.;"
hypothetical protein
L1_008_000G1_scaffold_563_8
Enterobacteriaceae bacterium bta3-1, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5256..7883
DNA (2628bp) protein (876aa)
Outer membrane usher protein MrkC n=1 Tax=Serratia sp. DD3 RepID=V5BUP9_9ENTR
P pilus assembly protein, porin PapC {ECO:0000313|EMBL:AJQ99111.1}; TaxID=1265478 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae.;" source="Enterobacteriaceae bacterium bta3-1.;"
P pilus assembly protein, porin PapC
L1_008_000G1_scaffold_563_9
Pantoea dispersa, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8166..8393
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Pantoea dispersa EGD-AAK13 RepID=U1TUI5_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ERH61834.1}; TaxID=1358411 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea dispersa EGD-AAK13.;"
hypothetical protein
L1_008_000G1_scaffold_563_10
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8674..9993)
DNA (1320bp) protein (440aa)
Diguanylate cyclase n=1 Tax=Enterobacter sp. R4-368 RepID=R9VLA3_9ENTR
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AGN85582.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L1_008_000G1_scaffold_563_11
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10254..11705)
DNA (1452bp) protein (484aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pectobacterium carotovorum subsp. carotovorum (strain PC1) RepID=C6DGK3_PECCP
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACT11090.1}; TaxID=561230 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. carotovorum (strain PC1).;"
L1_008_000G1_scaffold_563_12
Serratia sp. Ag1, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11979..12671
DNA (693bp) protein (231aa)
Two component heavy metal response transcriptional regulator, winged helix family n=1 Tax=Yersinia bercovieri ATCC 43970 RepID=C4RY34_YERBE
Transcriptional regulator {ECO:0000313|EMBL:KFL00541.1}; TaxID=1524467 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia sp. Ag1.;"
transcriptional regulator
L1_008_000G1_scaffold_563_13
Yersinia mollaretii, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12717..14120
DNA (1404bp) protein (468aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=349967 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia mollaretii ATCC 43969.;"
heavy metal sensor kinase family protein (EC:2.7.13.3)
Putative uncharacterized protein n=1 Tax=Yersinia mollaretii ATCC 43969 RepID=C4SE67_YERMO
L1_008_000G1_scaffold_563_14
Serratia liquefaciens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14162..14416)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Serratia liquefaciens ATCC 27592 RepID=S5EJ89_SERLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGQ29656.1}; TaxID=1346614 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia liquefaciens ATCC 27592.;"
L1_008_000G1_scaffold_563_15
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14840..15181
DNA (342bp) protein (114aa)
transcriptional regulator n=1 Tax=Enterobacter cloacae RepID=UPI000303703D
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHJ74849.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L1_008_000G1_scaffold_563_16
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15253..16815)
DNA (1563bp) protein (521aa)
Methyl-accepting chemotaxis (MCP) signaling domain protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QCH4_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS41968.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
chemotaxis protein
L1_008_000G1_scaffold_563_17
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17176..17490)
DNA (315bp) protein (105aa)
PTS cellobiose transporter subunit IIB n=1 Tax=Enterobacter cloacae RepID=UPI0002D49396
PTS cellobiose transporter subunit IIB
PTS cellobiose transporter subunit IIB {ECO:0000313|EMBL:AHJ74227.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L1_008_000G1_scaffold_563_18
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17869..18129
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VJX6_9ENTR
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:AGN85092.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L1_008_000G1_scaffold_563_19
Pantoea sp. GM01, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18275..19180)
DNA (906bp) protein (302aa)
Transcriptional regulator n=1 Tax=Pantoea sp. GM01 RepID=J2LVP1_9ENTR
Transcriptional regulator {ECO:0000313|EMBL:EJL89488.1}; TaxID=1144320 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. GM01.;"
LysR family transcriptional regulator
L1_008_000G1_scaffold_563_20
Pantoea sp. YR343, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19283..20353
DNA (1071bp) protein (357aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Pantoea sp. YR343 RepID=J2VCP7_9ENTR
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:EJN03722.1}; Flags: Precursor;; TaxID=1144341 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. YR343.;"
NAD-dependent dehydratase
L1_008_000G1_scaffold_563_21
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20995..23604
DNA (2610bp) protein (870aa)
Diguanylate cyclase domain protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IPX9_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS42618.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
Conserved putative membrane protein
L1_008_000G1_scaffold_563_22
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23883..25532
DNA (1650bp) protein (550aa)
methyl-accepting chemotaxis protein n=1 Tax=Enterobacter cloacae RepID=UPI0002FA162E
chemotaxis protein
Chemotaxis protein {ECO:0000313|EMBL:AHJ74878.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L1_008_000G1_scaffold_563_23
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25746..26450
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Enterobacter cloacae S611 RepID=V5B0X1_ENTCL
Uncharacterized protein {ECO:0000313|EMBL:ESS59562.1}; TaxID=1399146 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae S611.;"
hypothetical protein
L1_008_000G1_scaffold_563_24
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26519..27061)
DNA (543bp) protein (181aa)
Sigma-70 family RNA polymerase sigma factor n=4 Tax=Klebsiella oxytoca RepID=H3LN93_KLEOX
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHS98594.1}; TaxID=883120 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5245.;"
RNA polymerase subunit sigma-24
L1_008_000G1_scaffold_563_25
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27067..27453)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YIA8_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS44122.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
hypothetical protein
L1_008_000G1_scaffold_563_26
Enterobacter asburiae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28120..29259
DNA (1140bp) protein (380aa)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01167, ECO:0000256|SAAS:SAAS00016536}; EC=2.6.1.87 {ECO:0000256|HAMAP-Rule:MF_01167, ECO:0000256|SAAS:SAAS00016523};; UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase {ECO:0000256|HAMAP-Rule:MF_01167}; UDP-4-amino-4-deoxy-L-arabinose aminotransferase {ECO:0000256|HAMAP-Rule:MF_01167}; TaxID=640513 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter asburiae (strain LF7a).;"
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase n=1 Tax=Enterobacter asburiae (strain LF7a) RepID=G2S3J1_ENTAL
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase
L1_008_000G1_scaffold_563_27
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29262..30245
DNA (984bp) protein (328aa)
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase {ECO:0000256|HAMAP-Rule:MF_01164, ECO:0000256|SAAS:SAAS00016541}; EC=2.4.2.53 {ECO:0000256|HAMAP-Rule:MF_01164, ECO:0000256|SAAS:SAAS00016513};; Undecaprenyl-phosphate Ara4FN transferase {ECO:0000256|HAMAP-Rule:MF_01164}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase n=1 Tax=Citrobacter sp. KTE30 RepID=R8USZ8_9ENTR
UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase
L1_008_000G1_scaffold_563_28
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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30242..32224
DNA (1983bp) protein (661aa)
Bifunctional polymyxin resistance protein ArnA n=1 Tax=Enterobacter lignolyticus (strain SCF1) RepID=E3GA80_ENTLS
Bifunctional polymyxin resistance protein ArnA {ECO:0000256|HAMAP-Rule:MF_01166, ECO:0000256|SAAS:SAAS00018678}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
NAD-dependent epimerase/dehydratase
L1_008_000G1_scaffold_563_29
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32221..33120
DNA (900bp) protein (300aa)
Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD {ECO:0000256|HAMAP-Rule:MF_01870, ECO:0000256|SAAS:SAAS00011687}; EC=3.5.1.n3 {ECO:0000256|HAMAP-Rule:MF_01870};; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD n=5 Tax=Pantoea ananas RepID=D4GER6_PANAM
arnD; putative4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD
L1_008_000G1_scaffold_563_30
Enterobacter asburiae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33117..34778
DNA (1662bp) protein (554aa)
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase {ECO:0000256|HAMAP-Rule:MF_01165}; EC=2.4.2.43 {ECO:0000256|HAMAP-Rule:MF_01165};; 4-amino-4-deoxy-L-arabinose lipid A transferase {ECO:0000256|HAMAP-Rule:MF_01165}; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase {ECO:0000256|HAMAP-Rule:MF_01165}; Undecaprenyl phosphate-alpha-L-Ara4N transferase {ECO:0000256|HAMAP-Rule:MF_01165}; TaxID=1421338 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter asburiae L1.;"
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase n=1 Tax=Enterobacter sp. MGH 34 RepID=V3LVH2_9ENTR
arnT; 4-amino-4-deoxy-L-arabinose transferase
Displaying items 1-30 of 40 in total

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