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L1_008_000G1_scaffold_573

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_573_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..690
DNA (690bp) protein (230aa)
Glycosyl hydrolase, family 88 n=3 Tax=Lachnospiraceae RepID=A7B0C9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17316.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Glycoside Hydrolase Family 105-like unsaturated rhamnogalacturonyl hydrolase
L1_008_000G1_scaffold_573_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

791..2215
DNA (1425bp) protein (475aa)
Rhamnulokinase {ECO:0000313|EMBL:EDN78596.1}; EC=2.7.1.5 {ECO:0000313|EMBL:EDN78596.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
rhamnulokinase (EC:2.7.1.5)
Rhamnulokinase n=2 Tax=Clostridiales RepID=A7B0D0_RUMGN
L1_008_000G1_scaffold_573_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2220..3473
DNA (1254bp) protein (418aa)
L-rhamnose isomerase {ECO:0000256|HAMAP-Rule:MF_00541}; EC=5.3.1.14 {ECO:0000256|HAMAP-Rule:MF_00541};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L-rhamnose isomerase (EC:5.3.1.14)
L-rhamnose isomerase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UEE7_9FIRM
L1_008_000G1_scaffold_573_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3536..4348)
DNA (813bp) protein (271aa)
Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=A7B0D2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17319.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
AraC family transcriptional regulator
L1_008_000G1_scaffold_573_5
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4605..7106
DNA (2502bp) protein (834aa)
Glycosyl hydrolase family 31 n=2 Tax=Clostridiales RepID=R5TVE7_9FIRM
Glycosyl hydrolase family 31 {ECO:0000313|EMBL:CCZ67274.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
alpha-glucosidase
L1_008_000G1_scaffold_573_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7127..8149
DNA (1023bp) protein (341aa)
TRAP transporter solute receptor, DctP family n=4 Tax=Clostridiales RepID=A7B0D4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ67275.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
TRAP dicarboxylate transporter subunit DctP
L1_008_000G1_scaffold_573_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8162..8665
DNA (504bp) protein (168aa)
TRAP transporter, DctQ-like membrane protein n=2 Tax=Clostridiales RepID=A7B0D5_RUMGN
TRAP transporter, DctQ-like membrane protein {ECO:0000313|EMBL:EDN78601.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
TRAP dicarboxylate transporter subunit DctQ
L1_008_000G1_scaffold_573_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8665..9966
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UEF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67277.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
TRAP dicarboxylate transporter subunit DctM
L1_008_000G1_scaffold_573_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10029..12545
DNA (2517bp) protein (839aa)
alpha-glucosidase 2 (EC:3.2.1.20)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BQD6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17324.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L1_008_000G1_scaffold_573_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12671..12931)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TVF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67279.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_000G1_scaffold_573_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12949..13686)
DNA (738bp) protein (246aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BS62_RUMGN
Putative hydrolase {ECO:0000313|EMBL:EDN78606.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Histidinol phosphatase and related hydrolases of the PHP family
L1_008_000G1_scaffold_573_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13954..16485
DNA (2532bp) protein (844aa)
Formate C-acetyltransferase {ECO:0000313|EMBL:EDN78607.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EDN78607.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
glycerol dehydratase, cobalamin-independent, large subunit (EC:2.3.1.54 4.2.1.30)
Formate C-acetyltransferase n=3 Tax=Lachnospiraceae RepID=A7B0E1_RUMGN
L1_008_000G1_scaffold_573_13
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16510..17304
DNA (795bp) protein (265aa)
glycyl-radical enzyme activating protein family (EC:1.97.1.4)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UEF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67282.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_000G1_scaffold_573_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17426..18235
DNA (810bp) protein (270aa)
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases (EC:4.1.2.17)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TND2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67283.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_000G1_scaffold_573_15
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18255..18776
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TVF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67284.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Uncharacterized protein, possibly involved in utilization of glycolate and propanediol
L1_008_000G1_scaffold_573_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18767..20155
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TNP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67285.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
NAD-dependent aldehyde dehydrogenases
L1_008_000G1_scaffold_573_17
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20204..21424
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U813_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67286.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Threonine dehydrogenase and related Zn-dependent dehydrogenases
L1_008_000G1_scaffold_573_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21455..21808
DNA (354bp) protein (118aa)
BMC domain protein n=4 Tax=Clostridiales RepID=A7B0E8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47417.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L1_008_000G1_scaffold_573_19
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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21821..22102
DNA (282bp) protein (94aa)
BMC domain protein n=6 Tax=Clostridiales RepID=A7B0E9_RUMGN
Propanediol utilization protein pduA {ECO:0000313|EMBL:CDA97280.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L1_008_000G1_scaffold_573_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22135..22419
DNA (285bp) protein (95aa)
BMC domain protein n=4 Tax=Clostridiales RepID=A7B0F0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47415.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L1_008_000G1_scaffold_573_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22432..22887
DNA (456bp) protein (152aa)
BMC domain protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TNQ0_9FIRM
BMC domain protein {ECO:0000313|EMBL:CCZ67290.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L1_008_000G1_scaffold_573_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23032..23682
DNA (651bp) protein (217aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Propanediol utilization protein PduL n=4 Tax=Clostridiales RepID=A7B0F2_RUMGN
Propanediol utilization protein
L1_008_000G1_scaffold_573_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23723..23989
DNA (267bp) protein (89aa)
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=4 Tax=Clostridiales RepID=A7B0F3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17338.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L1_008_000G1_scaffold_573_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23997..25343
DNA (1347bp) protein (449aa)
Respiratory-chain NADH dehydrogenase 51 Kd subunit n=4 Tax=Clostridiales RepID=A7B0F4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17339.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfC
L1_008_000G1_scaffold_573_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25336..25884
DNA (549bp) protein (183aa)
BMC domain protein n=4 Tax=Clostridiales RepID=A7B0F5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47410.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L1_008_000G1_scaffold_573_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26010..26774
DNA (765bp) protein (255aa)
Transcriptional regulator, DeoR family n=4 Tax=Clostridiales RepID=A7B0F6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47409.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Transcriptional regulators of sugar metabolism
L1_008_000G1_scaffold_573_27
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26787..27932
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U827_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67296.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Alcohol dehydrogenase, class IV
L1_008_000G1_scaffold_573_28
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28244..28558
DNA (315bp) protein (105aa)
L-rhamnose mutarotase {ECO:0000256|SAAS:SAAS00048862}; EC=5.1.3.32 {ECO:0000256|SAAS:SAAS00169483};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
rhaU; L-rhamnose 1-epimerase (EC:5.1.3.-)
L-rhamnose mutarotase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UEH6_9FIRM
L1_008_000G1_scaffold_573_29
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28559..29434)
DNA (876bp) protein (292aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5TNE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67298.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
AraC family transcriptional regulator
L1_008_000G1_scaffold_573_30
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29810..30877
DNA (1068bp) protein (356aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TVH0_9FIRM
Displaying items 1-30 of 39 in total

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