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L1_008_000G1_scaffold_597

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_597_1
unknown

Not on your lists

comp(3..89)
DNA (87bp) protein (29aa)

This feature has no annotations

L1_008_000G1_scaffold_597_2
unknown

Not on your lists

comp(122..280)
DNA (159bp) protein (53aa)

This feature has no annotations

L1_008_000G1_scaffold_597_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

768..3431
DNA (2664bp) protein (888aa)
ATPase, P-type (transporting), HAD superfamily, subfamily IC (EC:3.6.3.8)
UPI00039E92C0 related cluster n=1 Tax=unknown RepID=UPI00039E92C0
ATPase {ECO:0000313|EMBL:KHD17070.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L1_008_000G1_scaffold_597_4
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3649..4695
DNA (1047bp) protein (349aa)
Biotin synthase {ECO:0000313|EMBL:ETD66601.1}; EC=2.8.1.6 {ECO:0000313|EMBL:ETD66601.1};; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
Biotin synthase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FRU5_CLOPA
biotin synthase
L1_008_000G1_scaffold_597_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5015..5746)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JF51_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KHD14298.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L1_008_000G1_scaffold_597_6
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6054..6965
DNA (912bp) protein (304aa)
Polysaccharide deacetylase n=1 Tax=Clostridium sp. DL-VIII RepID=G7LXK8_9CLOT
Polysaccharide deacetylase {ECO:0000313|EMBL:EHI97313.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
polysaccharide deacetylase
L1_008_000G1_scaffold_597_7
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7008..8024)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LQ56_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR32486.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L1_008_000G1_scaffold_597_8
unknown

Not on your lists

comp(8113..8268)
DNA (156bp) protein (52aa)

This feature has no annotations

L1_008_000G1_scaffold_597_9
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8372..8839
DNA (468bp) protein (156aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MCL1_9CLOT
L1_008_000G1_scaffold_597_10
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8893..9567)
DNA (675bp) protein (225aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=N9YSF8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ94222.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
L1_008_000G1_scaffold_597_11
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9885..10289
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MPP8_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41377.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_008_000G1_scaffold_597_12
unknown

Not on your lists

10289..10399
DNA (111bp) protein (37aa)

This feature has no annotations

L1_008_000G1_scaffold_597_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10718..12649
DNA (1932bp) protein (644aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
thrS; threonine--tRNA ligase ThrS (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGH6_CLOBU
L1_008_000G1_scaffold_597_14
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12697..14820)
DNA (2124bp) protein (708aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LQ52_CLOB8
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AJG96985.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
methyl-accepting chemotaxis sensory transducer
L1_008_000G1_scaffold_597_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14995..16359)
DNA (1365bp) protein (455aa)
Transglutaminase-like protein n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5R7P8_9FIRM
Transglutaminase-like protein {ECO:0000313|EMBL:CCZ36623.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
transglutaminase domain protein
L1_008_000G1_scaffold_597_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16518..17783)
DNA (1266bp) protein (422aa)
Protein MET17 n=4 Tax=Clostridium butyricum RepID=B1R042_CLOBU
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:ENZ30362.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein
L1_008_000G1_scaffold_597_17
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17860..20493)
DNA (2634bp) protein (878aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TXA8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ52251.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L1_008_000G1_scaffold_597_18
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20565..21137)
DNA (573bp) protein (191aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLK1_CLOSA
5-formyltetrahydrofolate cyclo-ligase
L1_008_000G1_scaffold_597_19
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21210..21629)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MPP4_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41372.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_008_000G1_scaffold_597_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21744..22505)
DNA (762bp) protein (254aa)
Formate/nitrite transporter n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1J6_CLOBU
Formate efflux transporter (2.A.44 family) {ECO:0000313|EMBL:KJZ87191.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ywcJ; transporter YwcJ
L1_008_000G1_scaffold_597_21
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22839..23453
DNA (615bp) protein (205aa)
HutD-family protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MGR6_9CLOT
HutD-family protein
HutD-family protein {ECO:0000313|EMBL:AGF54146.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L1_008_000G1_scaffold_597_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23528..25243)
DNA (1716bp) protein (572aa)
Cyclomaltodextrinase (EC:3.2.1.54)
Neopullulanase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J6A9_CLOBU
Neopullulanase {ECO:0000313|EMBL:ETI91631.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L1_008_000G1_scaffold_597_23
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25399..26133
DNA (735bp) protein (245aa)
Transcriptional regulator (Amidase and AraC-type DNA-binding HTH domain containing protein) n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T057_9CLOT
Transcriptional regulator (Amidase and AraC-type DNA-binding HTH domain containing protein) {ECO:0000313|EMBL:EKQ52243.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
helix-turn-helix domain-containing protein
L1_008_000G1_scaffold_597_24
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26199..26897)
DNA (699bp) protein (233aa)
Pullulanase, type I n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TBL5_9CLOT
Pullulanase, type I {ECO:0000313|EMBL:EKQ57293.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
amyX; alpha-dextran endo-1,6-alpha-glucosidase
L1_008_000G1_scaffold_597_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26887..27123)
DNA (237bp) protein (79aa)
Pullulanase {ECO:0000313|EMBL:KJZ85202.1}; EC=3.2.1.41 {ECO:0000313|EMBL:KJZ85202.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Pullulanase, type I n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AVT3_CLOBU
amyX; alpha-dextran endo-1,6-alpha-glucosidase
L1_008_000G1_scaffold_597_26
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27378..29333)
DNA (1956bp) protein (652aa)
Endonuclease MutS2 {ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|SAAS:SAAS00084246};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
mannonate oxidoreductase n=1 Tax=Clostridium beijerinckii RepID=UPI00030C81A5
DNA mismatch repair protein MutS domain-containing protein
L1_008_000G1_scaffold_597_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29722..31980)
DNA (2259bp) protein (753aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
malP; Maltodextrin phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K1W1_CLOBU
L1_008_000G1_scaffold_597_28
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32209..32814)
DNA (606bp) protein (202aa)
Putative membrane protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TJF6_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EKQ51615.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L1_008_000G1_scaffold_597_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32798..33829)
DNA (1032bp) protein (344aa)
sppA; putative signal peptide peptidase SppA (EC:3.4.21.-)
Periplasmic serine protease n=2 Tax=Clostridium butyricum RepID=B1R032_CLOBU
Signal peptide peptidase SppA, 36K type {ECO:0000313|EMBL:EEP55676.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L1_008_000G1_scaffold_597_30
unknown

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comp(33795..33923)
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

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