ggKbase home page

L1_008_000G1_scaffold_599

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_599_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

247..714
DNA (468bp) protein (156aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=4 Tax=Clostridium RepID=E7GRY3_CLOSY
ybaK/ebsC protein
L1_008_000G1_scaffold_599_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1144..1992
DNA (849bp) protein (283aa)
Cell Wall Hydrolase n=3 Tax=Clostridium symbiosum RepID=E7GRY4_CLOSY
Cell Wall Hydrolase {ECO:0000313|EMBL:ERI78440.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Cell Wall Hydrolase.
L1_008_000G1_scaffold_599_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2329..4026
DNA (1698bp) protein (566aa)
Phosphoenolpyruvate carboxykinase (ATP) {ECO:0000256|SAAS:SAAS00051801}; EC=4.1.1.49 {ECO:0000256|SAAS:SAAS00051801};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SM07_CLOSY
L1_008_000G1_scaffold_599_4
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4166..4837
DNA (672bp) protein (224aa)
haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E (EC:3.1.3.18)
5'-nucleotidase n=2 Tax=Clostridium RepID=E7GRY6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06559.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_000G1_scaffold_599_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4901..5482)
DNA (582bp) protein (194aa)
TM2 domain-containing protein n=4 Tax=Clostridium RepID=E7GRY7_CLOSY
TM2 domain-containing protein {ECO:0000313|EMBL:EGA92368.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
TM2 domain.
L1_008_000G1_scaffold_599_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5463..5933)
DNA (471bp) protein (157aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=E9SM04_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92369.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_000G1_scaffold_599_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5911..6300)
DNA (390bp) protein (130aa)
RNA polymerase sigma factor n=4 Tax=Clostridium RepID=E7GRY9_CLOSY
RNA polymerase sigma factor {ECO:0000313|EMBL:EGA92370.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
L1_008_000G1_scaffold_599_8
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6711..7874
DNA (1164bp) protein (388aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Phosphopentomutase n=3 Tax=Clostridium RepID=E7GRZ0_CLOSY
hypothetical protein
L1_008_000G1_scaffold_599_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7988..8641
DNA (654bp) protein (218aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=3 Tax=Clostridium RepID=E9SM01_CLOSY
L1_008_000G1_scaffold_599_10
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8834..9883
DNA (1050bp) protein (350aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=E9SM00_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06553.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_000G1_scaffold_599_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9861..10346
DNA (486bp) protein (162aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=4 Tax=Clostridium RepID=E7GRZ3_CLOSY
Cytidine deaminase {ECO:0000313|EMBL:EGA92374.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_000G1_scaffold_599_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10374..11699
DNA (1326bp) protein (442aa)
pyrimidine-nucleoside phosphorylase (EC:2.4.2.2)
Pyrimidine-nucleoside phosphorylase n=4 Tax=Clostridium RepID=E9SLZ8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92375.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_000G1_scaffold_599_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12165..12575
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SLZ7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI78454.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L1_008_000G1_scaffold_599_14
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13306..14550
DNA (1245bp) protein (415aa)
Membrane protein n=4 Tax=Clostridium RepID=E7GRZ7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06549.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Predicted permease
L1_008_000G1_scaffold_599_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14622..16865
DNA (2244bp) protein (748aa)
SpoIID/LytB domain protein n=2 Tax=Clostridium RepID=E9SLZ5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06548.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
SpoIID/LytB domain
L1_008_000G1_scaffold_599_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16984..17889)
DNA (906bp) protein (302aa)
Acetamidase n=2 Tax=Clostridium RepID=E7GRZ9_CLOSY
Acetamidase {ECO:0000313|EMBL:EGA92380.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Acetamidase/Formamidase
L1_008_000G1_scaffold_599_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17935..19161)
DNA (1227bp) protein (409aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
6-phosphofructokinase (EC:2.7.1.11)
Phosphofructokinase n=3 Tax=Clostridium RepID=E9SLZ3_CLOSY
L1_008_000G1_scaffold_599_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19987..20832
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GS01_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92382.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
prepilin-type N-terminal cleavage/methylation domain
L1_008_000G1_scaffold_599_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20837..21703
DNA (867bp) protein (289aa)
putative metallophosphoesterase (EC:3.1.-.-)
Phosphoesterase n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GS02_CLOSY
Phosphoesterase {ECO:0000313|EMBL:EGA92383.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_000G1_scaffold_599_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22017..22526
DNA (510bp) protein (170aa)
Uncharacterized protein n=3 Tax=Clostridium symbiosum RepID=E9SLY8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92384.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_000G1_scaffold_599_21
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22990..23676
DNA (687bp) protein (229aa)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Translaldolase n=4 Tax=Clostridium RepID=E7GS04_CLOSY
putative transaldolase
L1_008_000G1_scaffold_599_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23764..24636
DNA (873bp) protein (291aa)
Phosphogluconate dehydrogenase, NAD binding domain protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C0R0_CLOSY
Phosphogluconate dehydrogenase, NAD binding domain protein {ECO:0000313|EMBL:ERI77633.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
3-hydroxyisobutyrate dehydrogenase
L1_008_000G1_scaffold_599_23
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24671..25342
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=2 Tax=Clostridium RepID=E7GS06_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06539.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_000G1_scaffold_599_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25381..27387
DNA (2007bp) protein (669aa)
Alpha-glucosidase n=2 Tax=Clostridium RepID=E7GS07_CLOSY
Alpha-glucosidase {ECO:0000313|EMBL:EGA92388.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Alpha-glucosidases, family 31 of glycosyl hydrolases
L1_008_000G1_scaffold_599_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27388..28152
DNA (765bp) protein (255aa)
Sulfite exporter TauE/SafE n=4 Tax=Clostridium RepID=E7GS08_CLOSY
Sulfite exporter TauE/SafE {ECO:0000313|EMBL:EGA92389.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Sulfite exporter TauE/SafE.
L1_008_000G1_scaffold_599_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28262..29350
DNA (1089bp) protein (363aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=U2D841_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI77637.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L1_008_000G1_scaffold_599_27
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29468..29935
DNA (468bp) protein (156aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=U2C0R7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92391.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_000G1_scaffold_599_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29940..31325
DNA (1386bp) protein (462aa)
Membrane protein n=3 Tax=Clostridium RepID=E9SLY0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92392.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_000G1_scaffold_599_29
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31581..32918
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BZI9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI77640.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L1_008_000G1_scaffold_599_30
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33376..34512
DNA (1137bp) protein (379aa)
ROK family protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SLX8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06645.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
putative NAGC-like transcriptional regulator
Displaying items 1-30 of 36 in total

View Taxonomy