ggKbase home page

L1_008_000G1_scaffold_601

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_601_1
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(268..2592)
DNA (2325bp) protein (775aa)
Glycosyl hydrolase family 35 n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UPH6_9BACE
Glycosyl hydrolase family 35 {ECO:0000313|EMBL:CCZ73016.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
beta-galactosidase
L1_008_000G1_scaffold_601_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2625..4022)
DNA (1398bp) protein (466aa)
Glycosyl hydrolase family 109 protein 1 n=3 Tax=root RepID=I9EFP5_9BACE
Glycosyl hydrolase family 109 protein 1 {ECO:0000313|EMBL:EIY18839.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
oxidoreductase
L1_008_000G1_scaffold_601_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4052..6199)
DNA (2148bp) protein (716aa)
Alpha-N-acetylglucosaminidase (NAGLU) n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZBM4_9BACE
Alpha-N-acetylglucosaminidase (NAGLU) {ECO:0000313|EMBL:EDM21893.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Alpha-N-acetylglucosaminidase, Alpha-L-fucosidase
L1_008_000G1_scaffold_601_4
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6236..7816)
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U4N4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73013.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_000G1_scaffold_601_5
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7869..9545)
DNA (1677bp) protein (559aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UWC2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73012.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_000G1_scaffold_601_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9640..10950)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PR71_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18843.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
NHL repeat containing protein
L1_008_000G1_scaffold_601_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10959..12578)
DNA (1620bp) protein (540aa)
IPT/TIG domain protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U4T5_9BACE
IPT/TIG domain protein {ECO:0000313|EMBL:CCZ73010.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
NHL repeat containing protein
L1_008_000G1_scaffold_601_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12617..14482)
DNA (1866bp) protein (622aa)
SusD family protein n=2 Tax=Bacteroides caccae RepID=A5ZBL9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18845.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
RagB/SusD domain-containing protein
L1_008_000G1_scaffold_601_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14504..17941)
DNA (3438bp) protein (1146aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZBL8_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDM21887.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
TonB-dependent receptor plug
L1_008_000G1_scaffold_601_10
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18110..19090)
DNA (981bp) protein (327aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Bacteroides RepID=A5ZBL7_9BACE
Sigma factor regulatory protein FecR/PupR family {ECO:0000313|EMBL:CCZ73007.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
anti-sigma factor
L1_008_000G1_scaffold_601_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19257..19814
DNA (558bp) protein (186aa)
RNA polymerase sigma-70 factor n=2 Tax=Bacteroides caccae RepID=A5ZBL6_9BACE
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EIY18848.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
RNA polymerase ECF-type sigma factor
L1_008_000G1_scaffold_601_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19898..20911)
DNA (1014bp) protein (338aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZBL5_9BACE
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EDM21884.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
L1_008_000G1_scaffold_601_13
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20904..21026)
DNA (123bp) protein (41aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZBL4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73004.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_000G1_scaffold_601_14
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21058..22551)
DNA (1494bp) protein (498aa)
MBOAT family protein n=2 Tax=Bacteroides RepID=A5ZBL3_9BACE
MBOAT family protein {ECO:0000313|EMBL:CCZ73003.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Predicted membrane protein involved in D-alanine export
L1_008_000G1_scaffold_601_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22532..23455)
DNA (924bp) protein (308aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8V0T2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18852.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Lysophospholipase L1 and related esterases
L1_008_000G1_scaffold_601_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23442..24845)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZBL1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21880.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_000G1_scaffold_601_17
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25045..25338)
DNA (294bp) protein (98aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZBK9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73000.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_000G1_scaffold_601_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25351..28509)
DNA (3159bp) protein (1053aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZBK8_9BACE
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:EDM21877.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
cation efflux transporter
L1_008_000G1_scaffold_601_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28539..29555)
DNA (1017bp) protein (339aa)
Efflux transporter RND family MFP subunit n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U4L2_9BACE
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CCZ72998.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RND family efflux transporter, MFP subunit
L1_008_000G1_scaffold_601_20
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29590..30936)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8V0T7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72997.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
outer membrane efflux protein
L1_008_000G1_scaffold_601_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30993..31637)
DNA (645bp) protein (215aa)
Transcriptional regulator, TetR family n=3 Tax=Bacteroides RepID=A5ZBK5_9BACE
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDM21874.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_000G1_scaffold_601_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31989..32366)
DNA (378bp) protein (126aa)
Putative urocanate hydratase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZBK3_9BACE
Putative urocanate hydratase {ECO:0000313|EMBL:EDM21872.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
histidine ammonia-lyase
L1_008_000G1_scaffold_601_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32565..33209)
DNA (645bp) protein (215aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZBK2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18860.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_601_24
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34051..35865
DNA (1815bp) protein (605aa)
MutS domain V protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U4H8_9BACE
MutS domain V protein {ECO:0000313|EMBL:CCZ72993.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Mismatch repair ATPase (MutS family)
L1_008_000G1_scaffold_601_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35932..36474)
DNA (543bp) protein (181aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZBK0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21869.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_000G1_scaffold_601_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36578..36973)
DNA (396bp) protein (132aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZBJ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18863.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_601_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(37207..37704)
DNA (498bp) protein (166aa)
50S ribosomal protein L17 n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EFR3_9BACE
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
rplQ; 50S ribosomal protein L17
L1_008_000G1_scaffold_601_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37708..38700)
DNA (993bp) protein (331aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=2 Tax=Bacteroides caccae RepID=A5ZBJ7_9BACE
L1_008_000G1_scaffold_601_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(38712..39317)
DNA (606bp) protein (202aa)
30S ribosomal protein S4 n=3 Tax=Bacteroides RepID=A5ZBJ6_9BACE
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
rpsD; putative 30S ribosomal protein S4
L1_008_000G1_scaffold_601_30
Bacteroides intestinalis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(39435..39824)
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=4 Tax=Bacteroides RepID=A5ZBJ5_9BACE
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=471870 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides intestinalis DSM 17393.;"
Displaying items 1-30 of 38 in total

View Taxonomy