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L1_008_000G1_scaffold_615

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_615_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(563..1291)
DNA (729bp) protein (243aa)
UbiC transcription regulator-associated domain protein n=4 Tax=Clostridium RepID=U2B5X1_CLOSY
GntR family Regulatory protein {ECO:0000313|EMBL:EGA95413.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
transcriptional regulator, GntR family
L1_008_000G1_scaffold_615_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1394..3157)
DNA (1764bp) protein (588aa)
Aminobenzoyl-glutamate utilization protein B n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GID6_CLOSY
Aminobenzoyl-glutamate utilization protein B {ECO:0000313|EMBL:EGA95414.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
aminobenzoyl-glutamate utilization protein B
L1_008_000G1_scaffold_615_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3159..4142)
DNA (984bp) protein (328aa)
Peptide ABC transporter ATP-binding protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GID7_CLOSY
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EGA95415.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
appF9; Oligopeptide transport ATP-binding protein AppF
L1_008_000G1_scaffold_615_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4135..5127)
DNA (993bp) protein (331aa)
Oligopeptide ABC transporter ATP-binding protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GID8_CLOSY
Oligopeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EGA95416.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
appD3; Oligopeptide transport ATP-binding protein AppD
L1_008_000G1_scaffold_615_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5143..6570)
DNA (1428bp) protein (476aa)
Peptidase dimerization domain protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BP14_CLOSY
Peptidase dimerization domain protein {ECO:0000313|EMBL:ERI73558.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L1_008_000G1_scaffold_615_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6682..8358)
DNA (1677bp) protein (559aa)
ABC transporter, substrate-binding protein, family 5 n=2 Tax=Clostridium symbiosum RepID=U2B5X5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95418.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_000G1_scaffold_615_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8404..9273)
DNA (870bp) protein (290aa)
Oligopeptide ABC transporter n=2 Tax=Clostridium symbiosum RepID=E7GIE1_CLOSY
Putative oligopeptide ABC transporter, permease protein AppC {ECO:0000313|EMBL:ERI73560.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
oligopeptide ABC transporter
L1_008_000G1_scaffold_615_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9285..10238)
DNA (954bp) protein (318aa)
Oligopeptide ABC transporter n=2 Tax=Clostridium symbiosum RepID=E7GIE2_CLOSY
Oligopeptide ABC transporter {ECO:0000313|EMBL:EGA95420.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
appB5; Oligopeptide transport system permease protein AppB
L1_008_000G1_scaffold_615_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10512..11483)
DNA (972bp) protein (324aa)
SIS domain protein n=4 Tax=Clostridium RepID=E9SIE9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95421.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Predicted phosphosugar isomerases
L1_008_000G1_scaffold_615_10
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11499..13211)
DNA (1713bp) protein (571aa)
Hydantoinase/oxoprolinase n=3 Tax=Clostridium RepID=E7GIE4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05093.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_000G1_scaffold_615_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13211..15274)
DNA (2064bp) protein (688aa)
Hydantoin utilization protein A n=2 Tax=Clostridium symbiosum RepID=E7GIE5_CLOSY
Hydantoin utilization protein A {ECO:0000313|EMBL:EGA95423.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_000G1_scaffold_615_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15316..16182)
DNA (867bp) protein (289aa)
Ribokinase family Sugar kinase n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GIE6_CLOSY
Ribokinase family Sugar kinase {ECO:0000313|EMBL:EGA95424.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Sugar kinases, ribokinase family
L1_008_000G1_scaffold_615_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16392..18029)
DNA (1638bp) protein (546aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2CWE4_CLOSY
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:ERI73567.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Putative peptide transporter subunit: periplasmic-binding component of ABC superfamily protein
L1_008_000G1_scaffold_615_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18050..18877)
DNA (828bp) protein (276aa)
AgaC protein n=4 Tax=Clostridium RepID=E7GIE8_CLOSY
AgaC protein {ECO:0000313|EMBL:EGA95426.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
gsiD; Glutathione transport system permease protein GsiD
L1_008_000G1_scaffold_615_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18888..19847)
DNA (960bp) protein (320aa)
ABC transporter, permease protein n=4 Tax=Clostridium RepID=E9SIE3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05164.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Binding-protein-dependent transporter inner membrane component family protein 63
L1_008_000G1_scaffold_615_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19849..20829)
DNA (981bp) protein (327aa)
Oligopeptide ABC transporter, ATP-binding protein AppF n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2D7L7_CLOSY
Oligopeptide ABC transporter, ATP-binding protein AppF {ECO:0000313|EMBL:ERI75521.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
oligopeptide/dipeptide ABC transporter ATPase
L1_008_000G1_scaffold_615_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20822..21817)
DNA (996bp) protein (332aa)
Oligopeptide transport ATP-binding protein OppD n=3 Tax=Clostridium RepID=U2D213_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95429.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
peptide ABC transporter ATPase
L1_008_000G1_scaffold_615_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22392..24032)
DNA (1641bp) protein (547aa)
Sulfate permease n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BBK8_CLOSY
Sulfate permease {ECO:0000313|EMBL:ERI75524.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
sulfate transporter
L1_008_000G1_scaffold_615_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24374..25153)
DNA (780bp) protein (260aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SID9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95431.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_000G1_scaffold_615_20
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25387..26058)
DNA (672bp) protein (224aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Beta-galactosidase n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GIF4_CLOSY
beta-galactosidase
L1_008_000G1_scaffold_615_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26077..29469)
DNA (3393bp) protein (1131aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Beta-galactosidase (EC:3.2.1.23)
Beta galactosidase small chain n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2D218_CLOSY
L1_008_000G1_scaffold_615_22
unknown

Not on your lists

comp(29728..29952)
DNA (225bp) protein (75aa)

This feature has no annotations

L1_008_000G1_scaffold_615_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30018..31694)
DNA (1677bp) protein (559aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FEP0_9CLOT
Putative arginine utilization regulatory protein RocR {ECO:0000313|EMBL:ERI75528.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
sigma54 specific transcriptional regulator, Fis family
L1_008_000G1_scaffold_615_24
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31992..33689
DNA (1698bp) protein (566aa)
BCCT family transporter n=2 Tax=Clostridium RepID=E9SID5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05157.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_000G1_scaffold_615_25
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33755..35308
DNA (1554bp) protein (518aa)
histidine ammonia-lyase (EC:4.3.1.3)
Phenylalanine and histidine ammonia-lyase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SID4_CLOSY
Histidine ammonia-lyase {ECO:0000313|EMBL:EHF05156.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_000G1_scaffold_615_26
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35369..35626
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=U2D223_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05155.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_000G1_scaffold_615_27
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35728..37986)
DNA (2259bp) protein (753aa)
Ornithine cyclodeaminase/mu-crystallin family protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SID3_CLOSY
Choline-glycine betaine transporter {ECO:0000313|EMBL:EGA95437.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Choline-glycine betaine transporter
L1_008_000G1_scaffold_615_28
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38015..39535)
DNA (1521bp) protein (507aa)
Phenylalanine and histidine ammonia-lyase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SID2_CLOSY
Phenylalanine and histidine ammonia-lyase {ECO:0000313|EMBL:EHF05152.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
phenylalanine/histidine ammonia-lyase
Displaying 28 items

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