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L1_008_000G1_scaffold_620

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_620_1
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..618)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YRW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24206.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L1_008_000G1_scaffold_620_2
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

767..1504
DNA (738bp) protein (246aa)
Transcriptional regulator AraC family protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YTD8_9FIRM
Transcriptional regulator AraC family protein {ECO:0000313|EMBL:CDA24716.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
AraC family transcriptional regulator
L1_008_000G1_scaffold_620_3
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1505..4201)
DNA (2697bp) protein (899aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YCS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24715.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_620_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4237..6648)
DNA (2412bp) protein (804aa)
chitobiose phosphorylase (EC:2.4.1.-)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79130.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_008_000G1_scaffold_620_5
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6838..9090)
DNA (2253bp) protein (751aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YAZ7_9FIRM
L1_008_000G1_scaffold_620_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9339..10235
DNA (897bp) protein (299aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULF3_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CCZ79133.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L-rhamnose operon transcriptional activator
L1_008_000G1_scaffold_620_7
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10232..10717)
DNA (486bp) protein (162aa)
Phosphatidylglycerophosphatase B n=1 Tax=Roseburia sp. CAG:197 RepID=R5YAY9_9FIRM
Phosphatidylglycerophosphatase B {ECO:0000313|EMBL:CDA24703.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
phosphatidylglycerophosphatase B
L1_008_000G1_scaffold_620_8
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10733..11173)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z7A7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24702.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_620_9
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11296..11655)
DNA (360bp) protein (120aa)
SpoVA protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YTC7_9FIRM
SpoVA protein {ECO:0000313|EMBL:CDA24701.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
sporulation protein
L1_008_000G1_scaffold_620_10
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11657..12700)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YCR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24700.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
stage V sporulation protein AD
L1_008_000G1_scaffold_620_11
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12782..13306)
DNA (525bp) protein (175aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YIZ3_9FIRM
L1_008_000G1_scaffold_620_12
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13413..14111)
DNA (699bp) protein (233aa)
Paral putative regulator n=1 Tax=Roseburia sp. CAG:197 RepID=R5YAY8_9FIRM
Paral putative regulator {ECO:0000313|EMBL:CDA24698.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
conserved hypothetical protein TIGR00104
L1_008_000G1_scaffold_620_13
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14217..16409)
DNA (2193bp) protein (731aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z7A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24697.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_620_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16413..19169)
DNA (2757bp) protein (919aa)
beta-glucosidase (EC:3.2.1.21)
Glycoside hydrolase family 3 domain-containing protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJ02_9FIRM
Glycoside hydrolase family 3 domain-containing protein {ECO:0000313|EMBL:CCZ77990.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_008_000G1_scaffold_620_15
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19285..19476)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YCQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24695.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_620_16
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19602..19949)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YIY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24694.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_620_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20020..20508)
DNA (489bp) protein (163aa)
SpoVA protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIA2_9FIRM
SpoVA protein {ECO:0000313|EMBL:CCZ77993.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
SpoVA protein.
L1_008_000G1_scaffold_620_18
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20559..20900)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YAY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24693.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_620_19
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20970..21428)
DNA (459bp) protein (153aa)
Stage V sporulation protein AB n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z798_9FIRM
Stage V sporulation protein AB {ECO:0000313|EMBL:CDA24692.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
stage V sporulation protein AB
L1_008_000G1_scaffold_620_20
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21409..22056)
DNA (648bp) protein (216aa)
Stage V sporulation protein AA n=1 Tax=Roseburia sp. CAG:197 RepID=R5YTB7_9FIRM
Stage V sporulation protein AA {ECO:0000313|EMBL:CDA24691.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
stage V sporulation protein AA
L1_008_000G1_scaffold_620_21
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22040..22225)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YCQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24690.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_620_22
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22889..23668
DNA (780bp) protein (260aa)
Uncharacterized conserved protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YIY6_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CDA24689.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_620_23
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23665..24105
DNA (441bp) protein (147aa)
Uncharacterized conserved protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YAY0_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CDA24688.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_620_24
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24111..25397)
DNA (1287bp) protein (429aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z789_9FIRM
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:CDA24687.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_000G1_scaffold_620_25
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25553..26236)
DNA (684bp) protein (228aa)
GTP pyrophosphokinase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YTB3_9FIRM
GTP pyrophosphokinase {ECO:0000313|EMBL:CDA24686.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
GTP pyrophosphokinase
L1_008_000G1_scaffold_620_26
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26334..26597)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YCQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24685.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000G1_scaffold_620_27
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26597..27376)
DNA (780bp) protein (260aa)
RNA methyltransferase TrmH family group 3 n=1 Tax=Roseburia sp. CAG:197 RepID=R5YIY3_9FIRM
RNA methyltransferase TrmH family group 3 {ECO:0000313|EMBL:CDA24684.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
RNA methyltransferase, TrmH family, group 3
L1_008_000G1_scaffold_620_28
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27510..28481)
DNA (972bp) protein (324aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
6-phosphofructokinase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YAX9_9FIRM
6-phosphofructokinase
L1_008_000G1_scaffold_620_29
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28544..32041)
DNA (3498bp) protein (1166aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
DNA polymerase III catalytic subunit DnaE type n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z784_9FIRM
dnaE; DNA polymerase III DnaE
L1_008_000G1_scaffold_620_30
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32118..32909)
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6TCV2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC71273.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Displaying items 1-30 of 33 in total

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