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L1_008_000G1_scaffold_623

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_623_1
Actinomyces sp. oral taxon 172, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..425)
DNA (423bp) protein (141aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=1321775 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 172 str. F0311.;"
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Actinomyces sp. oral taxon 172 str. F0311 RepID=U1QMG2_9ACTO
class III aminotransferase
L1_008_000G1_scaffold_623_2
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(473..1504)
DNA (1032bp) protein (344aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
Delta-aminolevulinic acid dehydratase n=1 Tax=Actinomyces sp. ICM39 RepID=J3EH31_9ACTO
delta-aminolevulinic acid dehydratase
L1_008_000G1_scaffold_623_3
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1501..2307)
DNA (807bp) protein (269aa)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:EJN46486.1}; EC=4.2.1.75 {ECO:0000313|EMBL:EJN46486.1};; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
Uroporphyrinogen-III synthase n=1 Tax=Actinomyces sp. ICM39 RepID=J3J5J8_9ACTO
uroporphyrinogen-III synthase
L1_008_000G1_scaffold_623_4
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2304..3338)
DNA (1035bp) protein (345aa)
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Hydroxymethylbilane synthase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BAV5_9ACTO
L1_008_000G1_scaffold_623_5
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3335..4801)
DNA (1467bp) protein (489aa)
protoporphyrinogen oxidase (EC:1.3.3.4)
Putative protoporphyrinogen oxidase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BAV4_9ACTO
Putative protoporphyrinogen oxidase {ECO:0000313|EMBL:EDN80328.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
L1_008_000G1_scaffold_623_6
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4798..5895)
DNA (1098bp) protein (366aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Actinomyces sp. ICM39 RepID=J3J5F9_9ACTO
L1_008_000G1_scaffold_623_7
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6137..7459
DNA (1323bp) protein (441aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|SAAS:SAAS00041125}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|SAAS:SAAS00041125};; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
Glutamyl-tRNA reductase n=1 Tax=Actinomyces sp. ICM39 RepID=J2ZC49_9ACTO
glutamyl-tRNAGlu reductase, N-terminal domain protein
L1_008_000G1_scaffold_623_8
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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7501..8979
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Atopobium sp. ICM58 RepID=J2YXR7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EJN52933.1}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.;"
L1_008_000G1_scaffold_623_9
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9156..10106
DNA (951bp) protein (317aa)
Protein RarD n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A9X8_9ACTO
Protein RarD {ECO:0000313|EMBL:EPD73079.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
RarD protein, DMT superfamily transporter
L1_008_000G1_scaffold_623_10
unknown

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11016..11189
DNA (174bp) protein (58aa)

This feature has no annotations

L1_008_000G1_scaffold_623_11
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11657..13009)
DNA (1353bp) protein (451aa)
Replicative DNA helicase {ECO:0000313|EMBL:EWC97292.1}; EC=3.6.4.12 {ECO:0000313|EMBL:EWC97292.1};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
Replicative DNA helicase n=2 Tax=Actinomyces odontolyticus RepID=A7BAV0_9ACTO
replicative DNA helicase
L1_008_000G1_scaffold_623_12
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13349..14722
DNA (1374bp) protein (458aa)
MATE efflux family protein n=1 Tax=Actinomyces sp. ICM39 RepID=J2YQP9_9ACTO
MATE efflux family protein {ECO:0000313|EMBL:EWC97293.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
MATE efflux family protein
L1_008_000G1_scaffold_623_13
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


14988..15278
DNA (291bp) protein (97aa)
30S ribosomal protein S6 n=4 Tax=Actinomyces RepID=J3J5B6_9ACTO
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
30S ribosomal protein S6
L1_008_000G1_scaffold_623_14
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15314..15880
DNA (567bp) protein (189aa)
Single-stranded DNA-binding protein n=3 Tax=Actinomyces RepID=A7BAU7_9ACTO
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
single-strand binding protein
L1_008_000G1_scaffold_623_15
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


15975..16217
DNA (243bp) protein (81aa)
30S ribosomal protein S18 n=4 Tax=Actinomyces RepID=A7BAU6_9ACTO
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
rpsR; 30S ribosomal protein S18
L1_008_000G1_scaffold_623_16
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


16239..16697
DNA (459bp) protein (153aa)
50S ribosomal protein L9 n=2 Tax=Actinomyces RepID=J3J558_9ACTO
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
ribosomal protein L9
L1_008_000G1_scaffold_623_17
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16862..19207)
DNA (2346bp) protein (782aa)
Transglycosylase n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TZR0_9ACTO
Transglycosylase {ECO:0000313|EMBL:EWC96194.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
penicillin-binding protein
L1_008_000G1_scaffold_623_18
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19348..20814)
DNA (1467bp) protein (489aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Actinomyces sp. ICM39 RepID=J2ZC43_9ACTO
6-phosphogluconate dehydrogenase
L1_008_000G1_scaffold_623_19
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20918..22525)
DNA (1608bp) protein (536aa)
CCA tRNA nucleotidyltransferase n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A9W6_9ACTO
CCA tRNA nucleotidyltransferase {ECO:0000313|EMBL:EPD73069.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
RNA nucleotidyltransferase
L1_008_000G1_scaffold_623_20
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22658..23128
DNA (471bp) protein (157aa)
Hydrolase, NUDIX family n=3 Tax=Actinomyces RepID=A7BAU1_9ACTO
Hydrolase, NUDIX family {ECO:0000313|EMBL:EFF79562.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
NUDIX hydrolase
L1_008_000G1_scaffold_623_21
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23115..25550
DNA (2436bp) protein (812aa)
Tat pathway signal sequence domain protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BAU0_9ACTO
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EDN80314.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
hypothetical protein
L1_008_000G1_scaffold_623_22
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25547..28600
DNA (3054bp) protein (1018aa)
Putative integral membrane protein MviN n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TZM8_9ACTO
Putative murein biosynthesis integral membrane protein MurJ {ECO:0000313|EMBL:EWC96195.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
integral membrane protein MviN
L1_008_000G1_scaffold_623_23
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28619..29656
DNA (1038bp) protein (346aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BAT8_9ACTO
L1_008_000G1_scaffold_623_24
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29734..30084
DNA (351bp) protein (117aa)
UPF0225 protein HMPREF1478_00711 n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A9W3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFF79683.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
zinc chelation protein SecC
L1_008_000G1_scaffold_623_25
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30105..30746
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z8F7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD73063.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
L1_008_000G1_scaffold_623_26
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31876..38733)
DNA (6858bp) protein (2286aa)
Cna protein B-type domain protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3EEW7_9ACTO
Cna protein B-type domain protein {ECO:0000313|EMBL:EJN45199.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
hypothetical protein
L1_008_000G1_scaffold_623_27
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39211..39345)
DNA (135bp) protein (45aa)
Uncharacterized protein n=2 Tax=Actinomyces RepID=A7BAT1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EDN80305.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
Displaying 27 items

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