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L1_008_000G1_scaffold_638

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_638_1
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(720..2120)
-----------------
DNA (1401bp)
protein (467aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SLA5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04384.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_000G1_scaffold_638_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2497..3999
-----------------
DNA (1503bp)
protein (501aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=3 Tax=Clostridium RepID=E7GSW2_CLOSY
tRNA-i(6)A37 thiotransferase enzyme MiaB
L1_008_000G1_scaffold_638_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4014..5324
-----------------
DNA (1311bp)
protein (437aa)
ErfK/YbiS/YcfS/YnhG family protein n=4 Tax=Clostridium RepID=E7GSW1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04382.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_000G1_scaffold_638_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5360..8002
-----------------
DNA (2643bp)
protein (881aa)
DNA mismatch repair protein MutS n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SLA2_CLOSY
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
DNA mismatch repair protein MutS
L1_008_000G1_scaffold_638_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8021..10075
-----------------
DNA (2055bp)
protein (685aa)
DNA mismatch repair protein MutL n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SLA1_CLOSY
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
DNA mismatch repair protein MutL
L1_008_000G1_scaffold_638_6
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10179..11132
-----------------
DNA (954bp)
protein (318aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SLA0_CLOSY
L1_008_000G1_scaffold_638_7
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11161..12444
-----------------
DNA (1284bp)
protein (428aa)
Aluminum resistance protein n=2 Tax=Clostridium RepID=E9SL99_CLOSY
Aluminum resistance protein {ECO:0000313|EMBL:EHF04378.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Cystathionine beta-lyase family protein involved in aluminum resistance
L1_008_000G1_scaffold_638_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12339..12845)
-----------------
DNA (507bp)
protein (169aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SN71_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA91838.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_000G1_scaffold_638_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13337..13696
-----------------
DNA (360bp)
protein (120aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=U2BQ75_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI74380.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L1_008_000G1_scaffold_638_10
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13835..14512
-----------------
DNA (678bp)
protein (226aa)
DNA repair protein RadC n=3 Tax=Clostridium RepID=E7GSV5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04435.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
DNA repair protein RadC
L1_008_000G1_scaffold_638_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14515..15363
-----------------
DNA (849bp)
protein (283aa)
Cell shape-determining protein MreC n=4 Tax=Clostridium RepID=E7GSV4_CLOSY
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
rod shape-determining protein MreC
L1_008_000G1_scaffold_638_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15344..15862
-----------------
DNA (519bp)
protein (173aa)
Rod shape-determining protein MreD n=3 Tax=Clostridium RepID=E9SL95_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92176.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
rod shape-determining protein MreD
L1_008_000G1_scaffold_638_13
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15855..18740
-----------------
DNA (2886bp)
protein (962aa)
Penicillin-binding protein, transpeptidase domain protein n=3 Tax=Clostridium RepID=E9SL94_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04432.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
penicillin-binding protein transpeptidase
L1_008_000G1_scaffold_638_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18755..19417
-----------------
DNA (663bp)
protein (221aa)
Probable septum site-determining protein MinC n=3 Tax=Clostridium RepID=E7GSV1_CLOSY
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
septum site-determining protein MinC
L1_008_000G1_scaffold_638_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19483..20274
-----------------
DNA (792bp)
protein (264aa)
Site-determining protein n=4 Tax=Clostridium RepID=E7GSV0_CLOSY
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
septum site-determining protein MinD
L1_008_000G1_scaffold_638_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20290..20574
-----------------
DNA (285bp)
protein (95aa)
Cell division topological specificity factor n=4 Tax=Clostridium RepID=E7GSU9_CLOSY
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
cell division topological specificity factor MinE
L1_008_000G1_scaffold_638_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20571..21695
-----------------
DNA (1125bp)
protein (375aa)
Putative uncharacterized protein n=2 Tax=Clostridium RepID=G5FGP1_9CLOT
Putative rod shape-determining protein RodA {ECO:0000313|EMBL:ERI74372.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Bacterial cell division membrane protein
L1_008_000G1_scaffold_638_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21711..22106
-----------------
DNA (396bp)
protein (132aa)
Methylglyoxal synthase {ECO:0000256|SAAS:SAAS00089917}; EC=4.2.3.3 {ECO:0000256|SAAS:SAAS00089921};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=4 Tax=Clostridium RepID=E7GSU7_CLOSY
L1_008_000G1_scaffold_638_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22117..23082
-----------------
DNA (966bp)
protein (322aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=3 Tax=Clostridium RepID=E9SL88_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92169.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
D-alanyl-D-alanine carboxypeptidase
L1_008_000G1_scaffold_638_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23176..23595
-----------------
DNA (420bp)
protein (140aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SL87_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92168.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_000G1_scaffold_638_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23800..25203
-----------------
DNA (1404bp)
protein (468aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SL86_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92167.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_000G1_scaffold_638_22
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25225..25929
-----------------
DNA (705bp)
protein (235aa)
Pyridoxal phosphate enzyme, YggS family n=2 Tax=Clostridium RepID=E9SL85_CLOSY
YggS family pyridoxal phosphate enzyme {ECO:0000313|EMBL:EHF04423.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
alanine racemase
L1_008_000G1_scaffold_638_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25956..26432
-----------------
DNA (477bp)
protein (159aa)
Cell division protein SepF n=4 Tax=Clostridium RepID=E7GSU2_CLOSY
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_000G1_scaffold_638_24
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26440..27195
-----------------
DNA (756bp)
protein (252aa)
S4 domain protein n=3 Tax=Clostridium RepID=E9SL83_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04421.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Uncharacterized conserved protein, contains S4-like domain
L1_008_000G1_scaffold_638_25
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27335..28468
-----------------
DNA (1134bp)
protein (378aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=2 Tax=Clostridium RepID=E9SL82_CLOSY
L1_008_000G1_scaffold_638_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28461..28994
-----------------
DNA (534bp)
protein (178aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase n=4 Tax=Clostridium RepID=E7GST9_CLOSY
L1_008_000G1_scaffold_638_27
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29015..29932
-----------------
DNA (918bp)
protein (306aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Pseudouridine synthase n=2 Tax=Clostridium RepID=E9SL80_CLOSY
RluA family pseudouridine synthase
L1_008_000G1_scaffold_638_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29998..30654
-----------------
DNA (657bp)
protein (219aa)
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=3 Tax=Clostridium RepID=E9SL79_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92160.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_000G1_scaffold_638_29
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30863..31720
-----------------
DNA (858bp)
protein (286aa)
L-serine ammonia-lyase (EC:4.3.1.17)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GST6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92159.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_000G1_scaffold_638_30
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31802..32446
-----------------
DNA (645bp)
protein (215aa)
Cytidylate kinase (EC:2.7.4.14)
Uncharacterized protein n=3 Tax=Clostridium RepID=E9SL77_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92158.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Displaying items 1-30 of 37 in total

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