ggKbase home page

L1_008_000G1_scaffold_716

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_716_1

Not on your lists

comp(1..498)
DNA (498bp) protein (166aa)
Uncharacterized protein n=7 Tax=root RepID=C6IU49_9BACE
Conjugative transposon protein TraI {ECO:0000313|EMBL:EJX07757.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
conjugative transposon protein TraI
L1_008_000G1_scaffold_716_2
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(522..902)
DNA (381bp) protein (127aa)
Uncharacterized protein n=4 Tax=root RepID=C7X4E7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU52767.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
putative lipoprotein
L1_008_000G1_scaffold_716_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(932..3442)
DNA (2511bp) protein (837aa)
TraG family conjugation system ATPase n=3 Tax=root RepID=U6RAQ0_9BACE
Conjugation system ATPase, TraG family protein {ECO:0000313|EMBL:EXY76484.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
Domain of unknown function DUF87.
L1_008_000G1_scaffold_716_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3439..3771)
DNA (333bp) protein (111aa)
Conjugative transposon protein TraF n=1 Tax=Bacteroides fragilis 3_1_12 RepID=E4VR88_BACFG
Conjugative transposon protein TraF {ECO:0000313|EMBL:EFR52095.1}; TaxID=457424 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis 3_1_12.;"
conjugal transfer protein TraF
L1_008_000G1_scaffold_716_5
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3782..4093)
DNA (312bp) protein (104aa)
Conjugative transposon protein TraE n=4 Tax=Bacteroidetes RepID=G8UJ81_TANFA
conjugative transposon protein TraE
Conjugative transposon protein TraE {ECO:0000313|EMBL:AEW21096.1}; TaxID=203275 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338); (Bacteroides forsythus).;"
L1_008_000G1_scaffold_716_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4292..5032)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BEB6_9PORP
Putative traD {ECO:0000313|EMBL:EXY76487.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
conjugal transfer protein TraD
L1_008_000G1_scaffold_716_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5029..5391)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BEB7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EXY76488.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
L1_008_000G1_scaffold_716_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5418..5867)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BEB8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EXY76489.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
Conjugative transposon protein TraB
L1_008_000G1_scaffold_716_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5873..6628)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BEB9_9PORP
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EXY76490.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
Conjugative transposon protein TraA
L1_008_000G1_scaffold_716_10
Prevotella multiformis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7312..7737
DNA (426bp) protein (142aa)
Uncharacterized protein n=8 Tax=Bacteroidetes RepID=S8FG96_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGC19642.1}; TaxID=888743 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella multiformis DSM 16608.;"
L1_008_000G1_scaffold_716_11
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7716..8966
DNA (1251bp) protein (417aa)
Relaxase/mobilization nuclease domain protein n=2 Tax=Bacteroides RepID=D1K7U8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKB47227.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
Relaxase/Mobilisation nuclease domain.
L1_008_000G1_scaffold_716_12
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8999..10939
DNA (1941bp) protein (647aa)
TraG family protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X4D5_9PORP
TraG family protein {ECO:0000313|EMBL:EEU52755.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
TraG family protein
L1_008_000G1_scaffold_716_13
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11000..11542)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X4D4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB47225.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
hypothetical protein
L1_008_000G1_scaffold_716_14
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11588..12205)
DNA (618bp) protein (206aa)
RteC protein n=2 Tax=Bacteroides RepID=D6D1T6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKB47224.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
RteC protein.
L1_008_000G1_scaffold_716_15
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12446..12868)
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=B7BEC7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB47223.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
deaminase
L1_008_000G1_scaffold_716_16
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13148..14470)
DNA (1323bp) protein (441aa)
Putative fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X4C9_9PORP
Putative fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein {ECO:0000313|EMBL:EEU52749.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
L1_008_000G1_scaffold_716_17
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14463..16772)
DNA (2310bp) protein (770aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X4C8_9PORP
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EEU52748.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Signal transduction histidine kinase
L1_008_000G1_scaffold_716_18
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16777..18153)
DNA (1377bp) protein (459aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BED0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB47220.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
hypothetical protein
L1_008_000G1_scaffold_716_19
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18166..18588)
DNA (423bp) protein (141aa)
META domain protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X4C6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB47219.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
heat shock protein
L1_008_000G1_scaffold_716_20
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18590..18934)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BED2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB47218.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
hypothetical protein
L1_008_000G1_scaffold_716_21
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18937..19341)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X4C4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB47217.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
hypothetical protein
L1_008_000G1_scaffold_716_22
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19375..20748)
DNA (1374bp) protein (458aa)
MATE efflux family protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X4C3_9PORP
MATE efflux family protein {ECO:0000313|EMBL:EEU52743.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
MATE efflux family protein
L1_008_000G1_scaffold_716_23
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20860..22218)
DNA (1359bp) protein (453aa)
Peptidase, M56 family n=1 Tax=Parabacteroides sp. D13 RepID=C7X4C2_9PORP
Peptidase, M56 family {ECO:0000313|EMBL:EEU52742.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
TonB family protein
L1_008_000G1_scaffold_716_24
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22221..22586)
DNA (366bp) protein (122aa)
Transcriptional regulator, BlaI/MecI/CopY family n=1 Tax=Parabacteroides sp. D13 RepID=C7X4C1_9PORP
Transcriptional regulator, BlaI/MecI/CopY family {ECO:0000313|EMBL:EEU52741.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
transcriptional repressor, copy family
L1_008_000G1_scaffold_716_25
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22752..23117)
DNA (366bp) protein (122aa)
Glyoxalase family protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X4B9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB47213.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
hypothetical protein
L1_008_000G1_scaffold_716_26
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23211..23954)
DNA (744bp) protein (248aa)
4Fe-4S binding domain protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X4B8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB47212.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
flavodoxin
L1_008_000G1_scaffold_716_27
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24014..24643)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X4B7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB47211.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
L1_008_000G1_scaffold_716_28
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24640..25242)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9IDV8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKB47210.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
TetR family transcriptional regulator
L1_008_000G1_scaffold_716_29
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25318..26124)
DNA (807bp) protein (269aa)
Transcriptional regulator, AraC family n=1 Tax=Parabacteroides sp. D13 RepID=C7X4B5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB47209.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
transcriptional regulator, AraC family
L1_008_000G1_scaffold_716_30
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26237..26917)
DNA (681bp) protein (227aa)
Pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X4B3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB47208.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
general stress protein
Displaying items 1-30 of 71 in total

View Taxonomy