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L1_008_000G1_scaffold_813

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_813_1
Selenomonas sp. oral taxon 149, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3..644
DNA (642bp) protein (214aa)
Resolvase, N-terminal domain protein n=1 Tax=Selenomonas sp. oral taxon 149 str. 67H29BP RepID=E0P0Z1_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EFM22695.1}; TaxID=864563 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sp. oral taxon 149 str. 67H29BP.;"
resolvase, N-terminal domain protein
L1_008_000G1_scaffold_813_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(727..1983)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AHI2_BIFBR
Galactoside symporter
Uncharacterized protein {ECO:0000313|EMBL:EPD75804.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_000G1_scaffold_813_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2098..3549)
DNA (1452bp) protein (484aa)
Agl2 Alpha-glucosidase n=2 Tax=Bifidobacterium breve RepID=H3L0S9_BIFBR
Alpha-glucosidase
Uncharacterized protein {ECO:0000313|EMBL:EPD75803.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_000G1_scaffold_813_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3569..4495
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3A0V6_BIFBR
Transcriptional regulator, LacI family
Uncharacterized protein {ECO:0000313|EMBL:EPD75802.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_000G1_scaffold_813_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4682..5332
DNA (651bp) protein (217aa)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Oligoribonuclease n=2 Tax=Bifidobacterium breve RepID=H3L0T1_BIFBR
Oligoribonuclease
L1_008_000G1_scaffold_813_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5381..6403
DNA (1023bp) protein (341aa)
Helicase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HU16_BIFBI
PIF1 helicase domain protein
Putative helicase {ECO:0000313|EMBL:BAR00545.1}; Uncharacterized protein {ECO:0000313|EMBL:EFE88703.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_000G1_scaffold_813_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6348..6578
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZN36_BIFBR
Helicase
Uncharacterized protein {ECO:0000313|EMBL:EPD75800.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_000G1_scaffold_813_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7383..7985
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AHH7_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD75799.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Pyruvate formate-lyase activating enzyme
L1_008_000G1_scaffold_813_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8121..9935
DNA (1815bp) protein (605aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Proline--tRNA ligase n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZGD6_BIFBR
Prolyl-tRNA synthetase
L1_008_000G1_scaffold_813_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10199..10873
DNA (675bp) protein (225aa)
single-stranded DNA-binding protein n=1 Tax=Bifidobacterium breve RepID=UPI000306A10F
Single-strand DNA binding protein
Single-strand DNA binding protein {ECO:0000313|EMBL:ABE96138.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_008_000G1_scaffold_813_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10943..13126)
DNA (2184bp) protein (728aa)
Peptidase family M13 n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4R4_BIFBR
Peptidase family M13 {ECO:0000313|EMBL:ERI87381.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Zinc metalloprotease
L1_008_000G1_scaffold_813_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13291..14175
DNA (885bp) protein (295aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=U2CS78_BIFBR
putative membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75795.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_000G1_scaffold_813_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14339..15121
DNA (783bp) protein (261aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Methionine aminopeptidase n=5 Tax=Bifidobacterium breve RepID=F6C6F2_BIFBA
Methionine aminopeptidase
L1_008_000G1_scaffold_813_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15333..16625
DNA (1293bp) protein (431aa)
gltA; Citrate synthase (EC:2.3.3.1)
Citrate synthase n=4 Tax=Bifidobacterium breve RepID=F6C6F1_BIFBA
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_008_000G1_scaffold_813_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17000..18019)
DNA (1020bp) protein (340aa)
dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_02122};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; Tetrahydropicolinate succinylase {ECO:0000256|HAMAP-Rule:MF_02122}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=3 Tax=Bifidobacterium breve RepID=F9Y2Q1_BIFBU
L1_008_000G1_scaffold_813_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18197..22261
DNA (4065bp) protein (1355aa)
SNF2 family N-terminal domain protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C6E9_BIFBA
bacterial SNF2 helicase associated
SNF2 family N-terminal domain protein {ECO:0000313|EMBL:AEF27719.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_000G1_scaffold_813_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22267..22830)
DNA (564bp) protein (188aa)
Acetyltransferase, GNAT family n=3 Tax=Bifidobacterium breve RepID=D4BR70_BIFBR
Acetyltransferase
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFE88715.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_000G1_scaffold_813_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22985..23437
DNA (453bp) protein (151aa)
DNA mismatch endonuclease Vsr {ECO:0000313|EMBL:AEF28125.1}; EC=3.1.-.- {ECO:0000313|EMBL:AEF28125.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
DNA mismatch endonuclease Vsr n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C6E7_BIFBA
vsr; DNA mismatch endonuclease, patch repair protein
L1_008_000G1_scaffold_813_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23517..24572)
DNA (1056bp) protein (352aa)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Bifidobacterium breve RepID=D4BR72_BIFBR
NAD-dependent oxidoreductase
Uncharacterized protein {ECO:0000313|EMBL:EPD75788.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_000G1_scaffold_813_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24671..25882
DNA (1212bp) protein (404aa)
Aminotransferase (EC:2.6.1.-)
Aminotransferase, class I/II n=4 Tax=Bifidobacterium breve RepID=F6C6E5_BIFBA
Aminotransferase {ECO:0000313|EMBL:AHJ21620.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_000G1_scaffold_813_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25935..26903
DNA (969bp) protein (323aa)
Ppx/GppA phosphatase family protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C6E4_BIFBA
Ppx/GppA phosphatase family protein
Ppx/GppA phosphatase family protein {ECO:0000313|EMBL:AEF27606.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_000G1_scaffold_813_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26937..28076)
DNA (1140bp) protein (380aa)
Endonuclease/exonuclease/phosphatase family protein n=2 Tax=Bifidobacterium breve RepID=F6C6E3_BIFBA
putative membrane spanning protein with Endonuclease/Exonuclease/phosphatase family domain
Putative membrane spanning protein with Endonuclease/Exonuclease/phosphatase family domain {ECO:0000313|EMBL:AHJ19821.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_008_000G1_scaffold_813_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28431..28859
DNA (429bp) protein (143aa)
Nucleoside 2-deoxyribosyltransferase n=4 Tax=Bifidobacterium breve RepID=D4BR76_BIFBR
Hypothetical protein with nucleoside deoxyribosyltransferase (ntd) domain
Nucleoside 2-deoxyribosyltransferase {ECO:0000313|EMBL:EFE88721.1}; Putative nucleoside 2-deoxyribosyltransferase {ECO:0000313|EMBL:BAR00529.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_000G1_scaffold_813_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29047..29553
DNA (507bp) protein (169aa)
Large-conductance mechanosensitive channel n=3 Tax=Bifidobacterium breve RepID=F9Y2P2_BIFBU
Large-conductance mechanosensitive channel
Large conductance mechanosensitive channel protein {ECO:0000313|EMBL:EPD75783.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_000G1_scaffold_813_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29690..31546
DNA (1857bp) protein (619aa)
AMP-binding enzyme n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BR79_BIFBR
long chain fatty acid CoA ligase
Long chain fatty acid CoA ligase {ECO:0000313|EMBL:AHJ21615.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_000G1_scaffold_813_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31682..32206)
DNA (525bp) protein (175aa)
Flavodoxin-like protein n=2 Tax=Bifidobacterium breve RepID=F6C6D9_BIFBA
NAD(P)H oxidoreductase
NAD(P)H oxidoreductase {ECO:0000313|EMBL:AHJ21614.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_000G1_scaffold_813_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32273..32557)
DNA (285bp) protein (95aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Exodeoxyribonuclease 7 small subunit n=3 Tax=Bifidobacterium breve RepID=F6C6D8_BIFBA
Exodeoxyribonuclease VII small subunit
L1_008_000G1_scaffold_813_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32619..33974)
DNA (1356bp) protein (452aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Exodeoxyribonuclease 7 large subunit n=2 Tax=Bifidobacterium breve RepID=D4BR82_BIFBR
Exodeoxyribonuclease VII large subunit
L1_008_000G1_scaffold_813_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34388..36796
DNA (2409bp) protein (803aa)
nrdD; Anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EFE88728.1}; EC=1.17.4.2 {ECO:0000313|EMBL:EFE88728.1};; Ribonucleoside triphosphate reductase {ECO:0000313|EMBL:BAR00523.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Anaerobic ribonucleoside-triphosphate reductase n=4 Tax=Bifidobacterium breve RepID=F6C6D6_BIFBA
L1_008_000G1_scaffold_813_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36945..37667
DNA (723bp) protein (241aa)
Anaerobic ribonucleoside-triphosphate reductase activating protein {ECO:0000313|EMBL:EFE88729.1}; EC=1.97.1.4 {ECO:0000313|EMBL:EFE88729.1};; Ribonucleoside-triphosphate reductase activating protein {ECO:0000313|EMBL:BAR00522.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=2 Tax=Bifidobacterium breve RepID=D4BR84_BIFBR
Anaerobic ribonucleoside-triphosphate reductase activating protein
Displaying items 1-30 of 32 in total

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