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L1_008_000G1_scaffold_886

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_886_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..668)
DNA (666bp) protein (222aa)
Uncharacterized protein n=2 Tax=root RepID=I9J526_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY81554.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L1_008_000G1_scaffold_886_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(688..2265)
DNA (1578bp) protein (526aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HJ15_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS03756.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L1_008_000G1_scaffold_886_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2290..3291)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NWZ6_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS42625.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_008_000G1_scaffold_886_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3327..4244)
DNA (918bp) protein (306aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L1I2_BACV8
hypothetical protein
Putative lipoprotein {ECO:0000313|EMBL:EFG19132.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L1_008_000G1_scaffold_886_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4299..5537)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9A2G1_BACVU
Glycosyl Hydrolase Family 88 family protein {ECO:0000313|EMBL:KDS42624.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L1_008_000G1_scaffold_886_6
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5795..6505)
DNA (711bp) protein (237aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
Uridylate kinase n=13 Tax=Bacteroides RepID=PYRH_BACV8
pyrH; uridylate kinase
L1_008_000G1_scaffold_886_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6544..7869)
DNA (1326bp) protein (442aa)
MATE efflux family protein n=5 Tax=Bacteroides RepID=C6Z4T6_9BACE
MATE efflux family protein {ECO:0000313|EMBL:KDS42622.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
DNA-damage-inducible protein F
L1_008_000G1_scaffold_886_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8028..9467
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9J521_BACVU
Peptidase S41 family protein {ECO:0000313|EMBL:KDS42621.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
peptidase S41
L1_008_000G1_scaffold_886_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9464..10231)
DNA (768bp) protein (256aa)
Biotin-[acetyl-CoA-carboxylase] ligase n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9UH24_BACVU
Biotin-[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:EIY81548.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
biotin-(acetyl-CoA carboxylase) synthetase
L1_008_000G1_scaffold_886_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10215..10571)
DNA (357bp) protein (119aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9A2F7_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY81547.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L1_008_000G1_scaffold_886_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10589..10954)
DNA (366bp) protein (122aa)
UPF0102 protein BVU_1879 n=8 Tax=Bacteroides RepID=Y1879_BACV8
hypothetical protein
UPF0102 protein HMPREF1058_01118 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_000G1_scaffold_886_12
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10988..11263
DNA (276bp) protein (92aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7NN81_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF17941.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L1_008_000G1_scaffold_886_13
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11301..11699
DNA (399bp) protein (133aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
Cytidine and deoxycytidylate deaminase zinc-binding region n=12 Tax=Bacteroides RepID=C3Q5Y8_9BACE
cytosine/adenosine deaminase
L1_008_000G1_scaffold_886_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11703..12005)
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9UH19_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY81543.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L1_008_000G1_scaffold_886_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12058..12765)
DNA (708bp) protein (236aa)
CDP-diacylglycerol-serine O-phosphatidyltransferase n=7 Tax=Bacteroides RepID=A6L1J4_BACV8
CDP-diacylglycerol--serine O-phosphatidyltransferase
CDP-alcohol phosphatidyltransferase family protein {ECO:0000313|EMBL:KDS23355.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_008_000G1_scaffold_886_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12777..13463)
DNA (687bp) protein (229aa)
phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00093350};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Phosphatidylserine decarboxylase proenzyme n=9 Tax=root RepID=PSD_BACV8
L1_008_000G1_scaffold_886_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13655..17452
DNA (3798bp) protein (1266aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
DNA polymerase III alpha subunit n=5 Tax=Bacteroides RepID=A6L1J6_BACV8
DNA polymerase III subunit alpha
L1_008_000G1_scaffold_886_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17494..17808
DNA (315bp) protein (105aa)
Thioredoxin n=15 Tax=Bacteroides RepID=A6L1J7_BACV8
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_000G1_scaffold_886_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17844..18179
DNA (336bp) protein (112aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L1J8_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS03740.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_000G1_scaffold_886_20
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18359..19918
DNA (1560bp) protein (520aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6L1J9_BACV8
Uncharacterized protein {ECO:0000313|EMBL:EET15937.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_886_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20033..20254)
DNA (222bp) protein (74aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=A6L1K0_BACV8
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39564.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_000G1_scaffold_886_22
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20316..20744)
DNA (429bp) protein (143aa)
YjeE family ATPase n=7 Tax=Bacteroides RepID=I9A1B8_BACVU
ATPase/GTPase
Putative ATPase/GTPase {ECO:0000313|EMBL:CDF17931.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_000G1_scaffold_886_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20728..21579)
DNA (852bp) protein (284aa)
Zinc ABC transporter permease n=6 Tax=Bacteroides RepID=A6L1K2_BACV8
zinc ABC transporter permease
Uncharacterized protein {ECO:0000313|EMBL:EIY81534.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_000G1_scaffold_886_24
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21633..22052)
DNA (420bp) protein (140aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L1K3_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF17929.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_000G1_scaffold_886_25
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22057..23286)
DNA (1230bp) protein (410aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=3 Tax=Bacteroides RepID=C6Z4R8_9BACE
3-phosphoshikimate 1-carboxyvinyltransferase
L1_008_000G1_scaffold_886_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23445..24497)
DNA (1053bp) protein (351aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Deoxyribose-phosphate aldolase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V4U6_BACVU
Deoxyribose-phosphate aldolase {ECO:0000313|EMBL:EFG19154.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L1_008_000G1_scaffold_886_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24649..25410)
DNA (762bp) protein (254aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=5 Tax=Bacteroides RepID=A6L1K6_BACV8
gpmA; phosphoglyceromutase
L1_008_000G1_scaffold_886_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25561..26349
DNA (789bp) protein (263aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=I9J504_BACVU
ADP-ribosylglycohydrolase
ADP-ribosylglycohydrolase family protein {ECO:0000313|EMBL:KDS23345.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_008_000G1_scaffold_886_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26346..27317)
DNA (972bp) protein (324aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
DNA polymerase IV n=6 Tax=Bacteroides RepID=D4V4E9_BACVU
DNA damage-inducible protein
L1_008_000G1_scaffold_886_30
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27783..28643)
DNA (861bp) protein (287aa)
Transcriptional regulator, AraC family n=7 Tax=Bacteroides RepID=C6Z4Q5_9BACE
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:CDF17923.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
Displaying items 1-30 of 53 in total

View Taxonomy