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L1_008_000G1_scaffold_942

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_942_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(140..1123)
DNA (984bp) protein (328aa)
spoU; SpoU rRNA methylase family protein (EC:2.1.1.34)
RNA methyltransferase, TrmH family, group 3 n=2 Tax=Bifidobacterium dentium RepID=E0QA18_9BIFI
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:ETO97549.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_000G1_scaffold_942_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1375..1497)
DNA (123bp) protein (41aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S9I7_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETO97550.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_000G1_scaffold_942_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1911..4901
DNA (2991bp) protein (997aa)
pacL2; PacL2 Calcium-transporting ATPase (EC:3.6.3.8)
Putative calcium-translocating P-type ATPase, PMCA-type n=2 Tax=Bifidobacterium dentium RepID=E0QA20_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28094.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_942_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5055..5636)
DNA (582bp) protein (194aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
Deoxycytidine triphosphate deaminase n=4 Tax=Bifidobacterium dentium RepID=D2Q7M5_BIFDB
L1_008_000G1_scaffold_942_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5747..6505)
DNA (759bp) protein (253aa)
Phospholipase/carboxylesterase n=4 Tax=Bifidobacterium dentium RepID=D2Q7M4_BIFDB
phospholipase/carboxylesterase
Phospholipase/carboxylesterase {ECO:0000313|EMBL:ADB10786.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_000G1_scaffold_942_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6793..8865)
DNA (2073bp) protein (691aa)
Na+/H+ antiporter n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S9J3_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28091.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
nhaP; NhaP Na+/H+ antiporter nhaP
L1_008_000G1_scaffold_942_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8947..9402
DNA (456bp) protein (152aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
mesJ; tRNA-specific adenosine deaminase (EC:3.5.4.3)
MesJ tRNA-specific adenosine deaminase n=4 Tax=Bifidobacterium dentium RepID=D2Q7M2_BIFDB
L1_008_000G1_scaffold_942_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9560..11854
DNA (2295bp) protein (765aa)
aga; alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=2 Tax=Bifidobacterium dentium RepID=E0QA26_9BIFI
Alpha-galactosidase {ECO:0000313|EMBL:ETO97554.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_000G1_scaffold_942_9
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12303..13505)
DNA (1203bp) protein (401aa)
transcriptional repressor, ROK family (EC:2.7.1.4)
Transcriptional repressor, ROK family n=4 Tax=Bifidobacterium dentium RepID=D2Q7M0_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28088.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_942_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13688..14980
DNA (1293bp) protein (431aa)
Raffinose-binding protein n=4 Tax=Bifidobacterium dentium RepID=D2Q7L9_BIFDB
raffinose-binding protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28087.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_942_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14995..15909
DNA (915bp) protein (305aa)
Raffinose transport system permease protein n=2 Tax=Bifidobacterium dentium RepID=D2Q7L8_BIFDB
raffinose transporter permease
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28086.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_942_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15930..16805
DNA (876bp) protein (292aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium dentium RepID=E0QA30_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:EFM40622.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
raffinose transporter permease
L1_008_000G1_scaffold_942_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17033..18052)
DNA (1020bp) protein (340aa)
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0QA31_9BIFI
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EFM40623.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Transcriptional regulator, LacI family
L1_008_000G1_scaffold_942_14
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18380..19705
DNA (1326bp) protein (442aa)
ABC transporter, solute-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0QA32_9BIFI
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFM40624.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
ABC transporter substrate-binding protein
L1_008_000G1_scaffold_942_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19879..20742
DNA (864bp) protein (288aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium dentium RepID=E0QA33_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:EFM40625.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Permease protein of ABC transporter system for sugars
L1_008_000G1_scaffold_942_16
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20749..21573
DNA (825bp) protein (275aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium dentium RepID=E0QA34_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:EFM40626.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Permease protein of ABC transporter system for sugars
L1_008_000G1_scaffold_942_17
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21580..23310
DNA (1731bp) protein (577aa)
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EFM40627.1}; EC=3.2.1.93 {ECO:0000313|EMBL:EFM40627.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Alpha-1,4-glucosidase (EC:3.2.1.20)
Alpha amylase, catalytic domain protein n=2 Tax=Bifidobacterium dentium RepID=E0QA35_9BIFI
L1_008_000G1_scaffold_942_18
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23428..25248
DNA (1821bp) protein (607aa)
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EFM40628.1}; EC=3.2.1.70 {ECO:0000313|EMBL:EFM40628.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Oligo-1,6-glucosidase (EC:3.2.1.54)
Alpha amylase, catalytic domain protein n=2 Tax=Bifidobacterium dentium RepID=E0QA36_9BIFI
L1_008_000G1_scaffold_942_19
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25375..26682
DNA (1308bp) protein (436aa)
Threonine ammonia-lyase {ECO:0000313|EMBL:EFM40629.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EFM40629.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
tdcB; TdcB Threonine dehydratase (EC:4.3.1.19)
Threonine ammonia-lyase n=3 Tax=Bifidobacterium dentium RepID=E0QA37_9BIFI
L1_008_000G1_scaffold_942_20
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27012..28043)
DNA (1032bp) protein (344aa)
SIR2 family protein (EC:2.4.2.31)
Transcriptional regulator, Sir2 family n=2 Tax=Bifidobacterium dentium RepID=E0QA38_9BIFI
Transcriptional regulator, Sir2 family {ECO:0000313|EMBL:ETO97574.1}; Flags: Fragment;; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Displaying 20 items

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