ggKbase home page

L1_008_000G1_scaffold_954

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_954_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..84)
DNA (84bp) protein (28aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQW9_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ52199.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L1_008_000G1_scaffold_954_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(261..794)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZF97_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD75056.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
hypothetical protein
L1_008_000G1_scaffold_954_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(867..1283)
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=V6XWH2_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEF00054.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L1_008_000G1_scaffold_954_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1280..1705)
DNA (426bp) protein (142aa)
Uncharacterized protein n=7 Tax=root RepID=E4V9L3_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI83010.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L1_008_000G1_scaffold_954_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1698..2132)
DNA (435bp) protein (145aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum RepID=V6XWU1_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESV33638.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L1_008_000G1_scaffold_954_6
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2129..2638)
DNA (510bp) protein (170aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=U2CG47_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI94684.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
L1_008_000G1_scaffold_954_7
Bifidobacterium stellenboschense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2650..3054)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5Y0C7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI97818.1}; TaxID=762211 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stellenboschense.;"
L1_008_000G1_scaffold_954_8
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3054..3998)
DNA (945bp) protein (315aa)
Major capsid subunit gp9 n=4 Tax=Bifidobacterium bifidum RepID=K2HWB4_BIFBI
Major capsid subunit gp9 {ECO:0000313|EMBL:KFI94686.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
major capsid subunit gp9
L1_008_000G1_scaffold_954_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4009..4560)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Bifidobacterium bifidum RepID=UPI0001976419
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE50723.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L1_008_000G1_scaffold_954_10
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4705..5985)
DNA (1281bp) protein (427aa)
Gp4 phagic protein n=3 Tax=root RepID=E4P1M0_BIFBP
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32083.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
gp4 phagic protein
L1_008_000G1_scaffold_954_11
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5969..7369)
DNA (1401bp) protein (467aa)
Putative portal gp5 n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P1L9_BIFBP
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32082.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
portal gp5
L1_008_000G1_scaffold_954_12
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7363..9162)
DNA (1800bp) protein (600aa)
hypothetical protein n=1 Tax=Bifidobacterium bifidum RepID=UPI0001976415
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32081.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
terL; phage terminase protein large subunit TerL
L1_008_000G1_scaffold_954_13
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9159..9524)
DNA (366bp) protein (122aa)
Gp25 n=6 Tax=root RepID=E4P1L7_BIFBP
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32080.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
gp25
L1_008_000G1_scaffold_954_14
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9579..10085)
DNA (507bp) protein (169aa)
Gp60 n=2 Tax=Bifidobacterium bifidum RepID=K2I764_BIFBI
Gp60 {ECO:0000313|EMBL:KFI94693.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
gp60
L1_008_000G1_scaffold_954_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10904..11464)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSF6_BIFLS
Uncharacterized protein {ECO:0000313|EMBL:CEF11056.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
hypothetical protein
L1_008_000G1_scaffold_954_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11451..12497)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSF7_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ52737.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L1_008_000G1_scaffold_954_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12691..13449)
DNA (759bp) protein (253aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AUZ3_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ25586.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
hypothetical protein
L1_008_000G1_scaffold_954_18
unknown

Not on your lists

comp(13523..13717)
DNA (195bp) protein (65aa)

This feature has no annotations

L1_008_000G1_scaffold_954_19
unknown

Not on your lists

comp(13714..13968)
DNA (255bp) protein (85aa)

This feature has no annotations

L1_008_000G1_scaffold_954_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13965..14084)
DNA (120bp) protein (40aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=S2ZY91_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87258.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_008_000G1_scaffold_954_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14081..14401)
DNA (321bp) protein (107aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=T2I0D3_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:ERI87257.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
hypothetical protein
L1_008_000G1_scaffold_954_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14394..14588)
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B5S4_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KEY21299.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_008_000G1_scaffold_954_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14585..15172)
DNA (588bp) protein (196aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B5S0_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KEY21298.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
hypothetical protein
L1_008_000G1_scaffold_954_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15169..15381)
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5Y132_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KEY21297.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_008_000G1_scaffold_954_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15402..15806)
DNA (405bp) protein (135aa)
Leucyl-tRNA synthetase n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5Y131_9BIFI
Leucyl-tRNA synthetase {ECO:0000313|EMBL:KFI70513.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L1_008_000G1_scaffold_954_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15803..16924)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I059_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KFI70514.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L1_008_000G1_scaffold_954_27
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16928..18343)
DNA (1416bp) protein (472aa)
ParB-like partition protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5Y129_9BIFI
ParB-like partition protein {ECO:0000313|EMBL:EFV36423.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
parB-like partition protein
L1_008_000G1_scaffold_954_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18470..18877)
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3BDT7_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KEY21293.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
hypothetical protein
L1_008_000G1_scaffold_954_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18887..19456)
DNA (570bp) protein (190aa)
Single-stranded DNA-binding protein n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BDS3_BIFLN
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
ssb2; ssb2
L1_008_000G1_scaffold_954_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19459..19728)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BDQ7_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KFI70519.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Displaying items 1-30 of 44 in total

View Taxonomy