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L1_008_000G1_scaffold_3903

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_3903_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(371..907)
DNA (537bp) protein (179aa)
mgsA; methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Methylglyoxal synthase n=16 Tax=root RepID=A6L618_BACV8
L1_008_000G1_scaffold_3903_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1083..1757)
DNA (675bp) protein (225aa)
Uncharacterized protein n=10 Tax=Bacteroidales RepID=A7ALU1_9PORP
arginase
Uncharacterized protein {ECO:0000313|EMBL:EDN84337.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L1_008_000G1_scaffold_3903_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1789..4347)
DNA (2559bp) protein (853aa)
Alpha-glucan phosphorylase {ECO:0000313|EMBL:EFG18019.1}; EC=2.4.1.1 {ECO:0000313|EMBL:EFG18019.1};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Glycosyltransferase family 35, candidate alpha-glucan phosphorylase n=2 Tax=Bacteroides vulgatus RepID=A6L620_BACV8
glycosyltransferase family alpha-glucan phosphorylase
L1_008_000G1_scaffold_3903_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4369..6243)
DNA (1875bp) protein (625aa)
TrkA-C domain protein n=2 Tax=Bacteroides vulgatus RepID=D4V805_BACVU
TrkA-C domain protein {ECO:0000313|EMBL:EFG18018.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
sodium/proton antiporter
L1_008_000G1_scaffold_3903_5
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6197..7351)
DNA (1155bp) protein (385aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
6-phosphofructokinase n=2 Tax=Bacteroides vulgatus RepID=A6L622_BACV8
6-phosphofructokinase
L1_008_000G1_scaffold_3903_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7417..7872)
DNA (456bp) protein (152aa)
RNA polymerase ECF-type sigma factor n=2 Tax=Bacteroides vulgatus RepID=A6L623_BACV8
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:ABR41137.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_000G1_scaffold_3903_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7958..8386)
DNA (429bp) protein (143aa)
Small heat shock protein n=2 Tax=Bacteroides vulgatus RepID=A6L624_BACV8
small heat shock protein
Hsp20/alpha crystallin family protein {ECO:0000313|EMBL:EFG18015.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L1_008_000G1_scaffold_3903_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8454..9203)
DNA (750bp) protein (250aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=2 Tax=Bacteroides vulgatus RepID=A6L625_BACV8
gpmA; phosphoglyceromutase
L1_008_000G1_scaffold_3903_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9217..10266)
DNA (1050bp) protein (350aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase class I n=2 Tax=Bacteroides vulgatus RepID=A6L626_BACV8
Deoxyribose-phosphate aldolase {ECO:0000313|EMBL:EFG18013.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L1_008_000G1_scaffold_3903_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10295..10777)
DNA (483bp) protein (161aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Ferritin A n=2 Tax=Bacteroides vulgatus RepID=A6L627_BACV8
ferritin A
L1_008_000G1_scaffold_3903_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10828..11475)
DNA (648bp) protein (216aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L628_BACV8
integral membrane protein
UPF0056 inner membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_000G1_scaffold_3903_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11797..12006)
DNA (210bp) protein (70aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Uncharacterized protein n=2 Tax=Bacteroides dorei RepID=I9QNC7_9BACE
ferritin
Displaying 12 items

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