ggKbase home page

L1_008_000G1_scaffold_24_1

Organism: L1_008_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: comp(311..1876)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent transcriptional regulator PhhR n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BQ62_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 521.0
  • Bit_score: 1027
  • Evalue 0.0
phhR; sigma-54 dependent transcriptional regulator PhhR similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 521.0
  • Bit_score: 1027
  • Evalue 0.0
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 521.0
  • Bit_score: 1028
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1566
ATGCGTATCAAAGTGCACTGCCAGAACCGCATCGGCATCCTGCGGGACATCCTCAACCTGCTGGTGGAGTACGGCGTCAACGTCGCCAAGGGCGAAGTCGGCGGTGAGCATGGCAATGCCATCTACCTGTTCTGCCCCAACCTGGTGAACATGCAATTCCAGGCGTTGCGCCCGCAGTTCGAGGCGATTGCCGGAGTGTTCGGGGTCAAGCGGGTAGGGCTGATGCCCAGCGAGCGGCGGCATATGGAACTCAATGCGTTGCTCGGTGCCCTGGAATTCCCGGTGCTGTCCATTGATATGGGCGGCTCCATCGTGGCCGCCAACCGGGCGGCGGCGCAGTTGCTTGGCGTGCGGGTAGATGAAGTGCCGGGGATTCCCCTGTCGCGTTATGCCGAGGATTTTGACCTGCCGGAACTGGTGCGCGCCAGCAAGTCGCGAATCAATGGCCTGCGGGTCAAGGTCAAGGGCGACGTATTTCTGGCGGATATCGCGCCGCTGCAATCCTCCGAGCACGACGACAGCGAAGCCATGGCCGGCGCCGTGCTCACCCTGCACCGTGCCGACCGTGTCGGTGAGCGTATCTATAACGTGCGCAAGCAAGAGCTGCGCGGTTTCGACAGCATCTTCCAAAGCTCCAAGGTCATGGCCGCAGTGGTGCGTGAAGCGCGGCGCATGGCGCCGCTGGATGCGCCGCTATTAATAGAAGGCGAAACCGGCACCGGCAAGGAGCTATTGGCCCGGGCCTGCCACTTGGCCAGCCCGCGGGGGCAGTCGCCGTTGATGGCGCTCAACTGCGCGGGGTTGCCCGAGTCGATGGCCGAGACTGAACTGTTTGGCTATGGTCCCGGCGCATTTGAAGGGGCGCGGGCGGAAGGTAAATTGGGCCTGCTTGAGCTGACGGCGGGCGGTACCTTGTTTCTCGACGGCGTGGGAGAAATGAGCGCGCGCTTGCAGGTCAAGCTGCTGCGCTTTTTGCAGGATGGTTGTTTTCGCCGGGTGGGCAGTGATGAAGAGGTGTACCTGGACGTGCGGGTGATCTGCGCGACCCAGGTAGATTTGTCGGAACTCTGCGCCCGGGGTGAGTTTCGTCAGGACCTTTATCACCGGCTGAATGTGCTGTCGTTGCATATCCCGCCGTTGCGCGAATGCCTGGATGGCCTCGCGCCGTTGGTCGAGCACTTTCTCGACCAGGCCAGCCGGCAGATCGGTTGCCCACTGCCCAGGCTGGCCCCTGCGGCCATGGACAAACTCAGCCACTACCACTGGCCAGGCAACGTGCGGCAACTGGAAAACGTGCTGTTCCAGGCGGTGTCGTTGTGCGAAGGCGGCACGGTCAAGGTTGAGCATATTCGCTTGCCCGATTACGGCGTGCGTCAGCCGCTGGGTGATTTTTCCCTGGAGGGGAGCCTGGAGGATATCGTCGGGCGCTTTGAGAAGGCGGTGTTGGAAAGCCTGTACGCCGAACACCCGAGCAGCCGCCAGTTAGGCAAGCGTCTGGGAGTTTCCCACACCACCATTGCCAACAAGCTGCGTGATTACGAAGTGCTCAAGGCCGATCGCAGTTAA
PROTEIN sequence
Length: 522
MRIKVHCQNRIGILRDILNLLVEYGVNVAKGEVGGEHGNAIYLFCPNLVNMQFQALRPQFEAIAGVFGVKRVGLMPSERRHMELNALLGALEFPVLSIDMGGSIVAANRAAAQLLGVRVDEVPGIPLSRYAEDFDLPELVRASKSRINGLRVKVKGDVFLADIAPLQSSEHDDSEAMAGAVLTLHRADRVGERIYNVRKQELRGFDSIFQSSKVMAAVVREARRMAPLDAPLLIEGETGTGKELLARACHLASPRGQSPLMALNCAGLPESMAETELFGYGPGAFEGARAEGKLGLLELTAGGTLFLDGVGEMSARLQVKLLRFLQDGCFRRVGSDEEVYLDVRVICATQVDLSELCARGEFRQDLYHRLNVLSLHIPPLRECLDGLAPLVEHFLDQASRQIGCPLPRLAPAAMDKLSHYHWPGNVRQLENVLFQAVSLCEGGTVKVEHIRLPDYGVRQPLGDFSLEGSLEDIVGRFEKAVLESLYAEHPSSRQLGKRLGVSHTTIANKLRDYEVLKADRS*