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L1_008_000G1_scaffold_24

Search features with annotation key words

Displaying items 1-30 of 225 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_24_1
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(311..1876)
DNA (1566bp) protein (522aa)
Sigma-54 dependent transcriptional regulator PhhR n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BQ62_PSEFL
phhR; sigma-54 dependent transcriptional regulator PhhR
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_24_2
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2134..2925
DNA (792bp) protein (264aa)
phhA; phenylalanine-4-hydroxylase (EC:1.14.16.1)
PhhA protein {ECO:0000313|EMBL:AFJ56968.1}; EC=1.14.16.1 {ECO:0000313|EMBL:AFJ56968.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Phenylalanine-4-hydroxylase n=3 Tax=Pseudomonas RepID=I2BRT5_PSEFL
L1_008_000G1_scaffold_24_3
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3024..3380
DNA (357bp) protein (119aa)
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
Putative pterin-4-alpha-carbinolamine dehydratase n=4 Tax=Pseudomonas RepID=I2BWS5_PSEFL
L1_008_000G1_scaffold_24_4
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3380..4573
DNA (1194bp) protein (398aa)
Aromatic amino acid aminotransferase n=2 Tax=Pseudomonas RepID=S6H593_9PSED
aminotransferase family protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_24_5
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4753..5562)
DNA (810bp) protein (270aa)
Ser/Thr protein phosphatase family protein n=3 Tax=Pseudomonas RepID=I2BST8_PSEFL
Ser/Thr protein phosphatase family protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_24_6
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5700..6449
DNA (750bp) protein (250aa)
Transcriptional regulator, AraC family n=2 Tax=Pseudomonas RepID=I2BVW0_PSEFL
AraC family transcriptional regulator
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_24_7
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6550..7431
DNA (882bp) protein (294aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=S6K881_9PSED
transporter, drug/metabolite exporter family
Uncharacterized protein {ECO:0000313|EMBL:AFJ55518.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_24_8
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7434..7724)
DNA (291bp) protein (97aa)
SelT/selW/selH selenoprotein domain protein n=3 Tax=Pseudomonas RepID=I2BRU8_PSEFL
selT/selW/selH selenoprotein domain protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_24_9
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7805..9994
DNA (2190bp) protein (730aa)
phospholipase, patatin family (EC:3.1.1.-)
Patatin-like phospholipase n=1 Tax=Pseudomonas sp. CF150 RepID=S6IXJ2_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_24_10
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10115..10549)
DNA (435bp) protein (145aa)
Transcriptional regulator, MarR family n=5 Tax=Pseudomonas RepID=I2BKJ2_PSEFL
MarR family transcriptional regulator
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_24_11
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10671..12800)
DNA (2130bp) protein (710aa)
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
RecQ protein {ECO:0000313|EMBL:AFJ59132.1}; EC=3.6.1.- {ECO:0000313|EMBL:AFJ59132.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
ATP-dependent DNA helicase RecQ n=3 Tax=Pseudomonas RepID=I2BXZ9_PSEFL
L1_008_000G1_scaffold_24_12
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13077..13664
DNA (588bp) protein (196aa)
YecA family protein n=3 Tax=Pseudomonas RepID=I2C029_PSEFL
YecA family protein
YecA family protein {ECO:0000313|EMBL:EIK62596.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
L1_008_000G1_scaffold_24_13
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13676..14068
DNA (393bp) protein (131aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BTR2_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ57645.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_24_14
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14188..17658
DNA (3471bp) protein (1157aa)
Putative transmembrane two-component system, sensor kinase/regulator hybrid n=1 Tax=Pseudomonas sp. CFT9 RepID=S6H598_9PSED
sensory box histidine kinase/response regulator
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_24_15
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17707..19200)
DNA (1494bp) protein (498aa)
DNA recombination protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6IUM3_9PSED
RmuC domain-containing protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_24_16
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19247..19648)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BMD7_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_24_17
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20028..20333
DNA (306bp) protein (102aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BKA5_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ54688.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_24_18
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20777..21001
DNA (225bp) protein (75aa)
Uncharacterized protein n=4 Tax=Pseudomonas RepID=I2BLN0_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIK63715.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
L1_008_000G1_scaffold_24_19
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21281..21763
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BQ88_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_24_20
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21909..23186
DNA (1278bp) protein (426aa)
Outer membrane protein transport protein, OMPP1/FadL/TodX family n=4 Tax=Pseudomonas RepID=I2BVK6_PSEFL
outer membrane protein transport protein, OMPP1/FadL/TodX family
Transporter, Ompp1/FadL/TodX family {ECO:0000313|EMBL:EIK62213.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
L1_008_000G1_scaffold_24_21
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23251..23802)
DNA (552bp) protein (184aa)
Glutathione peroxidase n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BTI3_PSEFL
glutathione peroxidase
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_24_22
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23837..23956)
DNA (120bp) protein (40aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BYV2_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_24_23
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23953..25161)
DNA (1209bp) protein (403aa)
Transporter, major facilitator family n=3 Tax=Pseudomonas RepID=I2BMK5_PSEFL
major facilitator family transporter
Uncharacterized protein {ECO:0000313|EMBL:AFJ55488.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_24_24
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25216..25620)
DNA (405bp) protein (135aa)
Transcriptional regulator, MarR family n=3 Tax=Pseudomonas RepID=I2BKK4_PSEFL
MarR family transcriptional regulator
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_24_25
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25663..26394)
DNA (732bp) protein (244aa)
cobS; cobalamin 5'-phosphate synthase (EC:2.7.8.26)
Cobalamin synthase n=2 Tax=Pseudomonas RepID=S6H0G2_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_24_26
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26394..26969)
DNA (576bp) protein (192aa)
cobC; alpha-ribazole phosphatase (EC:3.1.3.73)
CobC protein {ECO:0000313|EMBL:AFJ58478.1}; EC=3.1.3.73 {ECO:0000313|EMBL:AFJ58478.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Alpha-ribazole phosphatase n=3 Tax=Pseudomonas RepID=I2BW45_PSEFL
L1_008_000G1_scaffold_24_27
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26966..28021)
DNA (1056bp) protein (352aa)
cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BUK9_PSEFL
L1_008_000G1_scaffold_24_28
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28018..28539)
DNA (522bp) protein (174aa)
cobU; bifunctional adenosylcobalamin biosynthesis protein CobU (EC:2.7.1.156 2.7.7.62)
Adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase n=2 Tax=Pseudomonas RepID=S6IA26_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_24_29
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28988..30439)
DNA (1452bp) protein (484aa)
cobQ; cobyric acid synthase CobQ (EC:6.3.5.10)
Cobyric acid synthase n=3 Tax=Pseudomonas RepID=I2BLS5_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_24_30
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30436..31425)
DNA (990bp) protein (330aa)
threonine-phosphate decarboxylase (EC:4.1.1.81)
Threonine-phosphate decarboxylase n=1 Tax=Pseudomonas sp. CF150 RepID=S6IUK9_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
Displaying items 1-30 of 225 in total

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