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L1_008_000G1_scaffold_24_51

Organism: L1_008_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: comp(54188..55540)

Top 3 Functional Annotations

Value Algorithm Source
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 450.0
  • Bit_score: 892
  • Evalue 4.50e-257
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 450.0
  • Bit_score: 892
  • Evalue 2.20e-256
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=2 Tax=Pseudomonas RepID=S6GVG7_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 450.0
  • Bit_score: 894
  • Evalue 4.20e-257

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1353
ATGGCCAAGCACGAGAGAGGCTTGCGCTTCCAGCCAACGGGCGGCAGCCGGGCCCCGCAGATCCCGGTGGGCAAGAAACAACGCCTGACCATCGAGCGCCTGGCCAATGATGGCCGAGGCATCGTGTTCTTTGAAGGCCGCACCTGGTTTGTGACTGGTGCGTTGGCCGGCGAAGAGGTGGAAGCACGGGTGCTGGGCGCCCATGGCAAAGTGGTCGAGGCGCGCACCGAGCGGGTGTTCCAGGCGAGTGAGCTGCGGCGCCCTGCGCCCTGCGCTCATGTTGGCCGCTGTGGCGGCTGCAGCGTGCAGCATCTGCCTCATGACCAGCAACTTGCCCTGAAACAGCGCATGCTCGCCGAGCAACTGTCGCGGGTGGCAGGTGTCGAACCGCAAGAGTGGGCCGCGCCGTTGAGCGGGCCGGAGTTCGGTTATCGGCGCCGCGCCCGCGTAGCCGTGCGTTGGGACGCCAAGGCGAAGCAACTCGAAGTGGGTTTTCGCGCCGTGGCCAGTCAGGACATCGTCGCTATCGATGATTGCCCGGTGCTGGTACAGGCCTTGCAACCGATCATGCAGCGTTTGCCAGCGATGCTGCGTCGCTTGAGCAAACCGCAGGCGTTGGGGCATGTCGAGTTGTTCAGCGGTTCGTCCATCGCCGTGTTGCTGCGGCATATGGCGCCGTTGTCCGAGGCTGACCTGCAGATCCTCAAGGAATTCTGCACCTTCCATGACGCCCAATTGTGGCTGCACGGGGAAGGGCAGCCGGAGCCCGTCGAGCCGGGTCAGGCCCTGGGCTTCCGTTTGGAGGCGTGGGATCTGGAGCTGGCGTACCGTCCGGGCGACTTTGTGCAGGTCAACGCCGGGGTCAACCAGGCGATGGTCGCCCAAGCCCTGCAATGGCTCGCGCCACAAGCCGACGAACGGGTACTGGACCTGTTTTGCGGCCTGGGCAATTTCGCCCTGCCACTGGCTCGCCACGTACGCGAAGTGGTGGCGGTGGAGGGCGTACAGGCCATGGTGGACCGTGCGGCCCTCAATGCCGTCAGCAACCATTTGCATAACGCACAGTTTTTTCAGGCCGATTTGTCCCAGCCTTTGACCGACGCAGAATGGGCCAAACAGGGCTTTTCTGCGGTACTCTTGGACCCACCCCGCGATGGTGCCCTGGAGGTTGTGCGCAAACTCGCCGCCTTGGGGGCCAAGCGCCTGGTGTATGTGTCCTGCAACCCAGCCACGCTGGCGCGGGACACGGTTGAGTTGGTCAAGCAAGGCTACCGGCTAAAGCGTGCCGGGATCCTCGACATGTTTCCGCAGACCGCGCATGTCGAGGCCATGGCGTTATTTGAAGCGGGCTAG
PROTEIN sequence
Length: 451
MAKHERGLRFQPTGGSRAPQIPVGKKQRLTIERLANDGRGIVFFEGRTWFVTGALAGEEVEARVLGAHGKVVEARTERVFQASELRRPAPCAHVGRCGGCSVQHLPHDQQLALKQRMLAEQLSRVAGVEPQEWAAPLSGPEFGYRRRARVAVRWDAKAKQLEVGFRAVASQDIVAIDDCPVLVQALQPIMQRLPAMLRRLSKPQALGHVELFSGSSIAVLLRHMAPLSEADLQILKEFCTFHDAQLWLHGEGQPEPVEPGQALGFRLEAWDLELAYRPGDFVQVNAGVNQAMVAQALQWLAPQADERVLDLFCGLGNFALPLARHVREVVAVEGVQAMVDRAALNAVSNHLHNAQFFQADLSQPLTDAEWAKQGFSAVLLDPPRDGALEVVRKLAALGAKRLVYVSCNPATLARDTVELVKQGYRLKRAGILDMFPQTAHVEAMALFEAG*