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L1_008_000G1_scaffold_17_2

Organism: L1_008_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: comp(1312..1965)

Top 3 Functional Annotations

Value Algorithm Source
opuCB; glycine betaine/carnitine/choline ABC transporter, permease protein (EC:3.6.3.32) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 217.0
  • Bit_score: 415
  • Evalue 5.90e-114
Glycine betaine/carnitine/choline ABC transporter, permease protein {ECO:0000313|EMBL:EIK62921.1}; EC=3.6.3.32 {ECO:0000313|EMBL:EIK62921.1};; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 217.0
  • Bit_score: 415
  • Evalue 2.90e-113
Glycine betaine/carnitine/choline ABC transporter, permease protein n=4 Tax=Pseudomonas RepID=I2BMT4_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 217.0
  • Bit_score: 415
  • Evalue 2.10e-113

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGGAATTTTTGAACGCCTTTTCCCATCTTGATTGGGCCCAGGTCCTACACCTGACCTGGCAGCACATCACCCTGGTCGGCATCGCAGTGATCCTCGCGATCTTCATCGGCGTGCCCCTGGGCATTCTGATGACGCGCTTCCCGACCCTGGCCGGCCCGTTGCAAGCCAGCGCCACAGTGTTGCTGACCGTGCCATCCATCGCGCTGTTCGGCCTGCTGCTGCCGTTCTACTCCAAGTTCGGCCAGGGCCTGGGGCCAATGCCGGCGATCACCGCCGTGTTCCTTTACTCCCTGCTGCCAATCATGCGTAACACCTACCTGGCCCTCACCGGCGTTGAGCCAGGCATTCGCGAAGCCGCACGCGGCATCGGCATGACCTTCGGCCAGCGCCTGCGCATGGTCGAACTGCCGATTGCGGTGCCGGTGATTCTCGCTGGCGTGCGTACCGCCGTGGTGATGAATATCGGTGTGATGACCATCGCCGCCACCATCGGTGCCGGTGGCCTGGGTGTACTTATTCTGGCTTCCATCAGCCGCAGCGATATGTCGATGCTGATCGTCGGCGCCGTGCTGGTCAGTCTCCTGGCCATCTTCGCCGACCTGCTTCTGCAATGGCTGCAACGCTCGCTGACTCCAAAAGGATTGCTCAAATGA
PROTEIN sequence
Length: 218
MEFLNAFSHLDWAQVLHLTWQHITLVGIAVILAIFIGVPLGILMTRFPTLAGPLQASATVLLTVPSIALFGLLLPFYSKFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAARGIGMTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAGGLGVLILASISRSDMSMLIVGAVLVSLLAIFADLLLQWLQRSLTPKGLLK*