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L1_008_000G1_scaffold_17_72

Organism: L1_008_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: comp(79007..79579)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide ABC transporter, permease protein LptC, putative n=3 Tax=Pseudomonas RepID=I2BMF5_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 190.0
  • Bit_score: 379
  • Evalue 1.50e-102
lptC; lipopolysaccharide ABC transporter, permease protein LptC similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 190.0
  • Bit_score: 379
  • Evalue 4.10e-103
Lipopolysaccharide export system protein LptC {ECO:0000256|HAMAP-Rule:MF_01915}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 190.0
  • Bit_score: 379
  • Evalue 2.10e-102

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGCTGAGCAAAAAGATTCGCAACTTCCTGTTATTCGGGGTCATCGCCGCGCTGCTCCTGGCGGTGGGCTACTGGAATATCAGCCCGGAGCGCTTCCTCGACAAGCCTGTTGCGCAGGTTGACGAAGGTCTTATCGACTATTACGCCACCAATGCCTACAGCATTCAGTACCTGCCTGACGGCAAGGTGCAGTATGAGATGACATCGGACAAGGTCGAGCACTTGAAGGCTTCCGAAGTCAGCCTGCTGACCAATCCGGACCTGAACCTGTATCGCGGCACCGAATTTCCCTGGCACGTCACCAGCAAGCGTGGCGAGGTCAACCCGGATGGCACCGAAGTTGAACTGATCGACTCGGTTCGCGTCGCACGTACAGACGCGCAGAACCGCGACACCATCATTACCAGCAGTCGCATGACCGTATTCCCACAGAAGCAATATGCGCAGACCGAGCAAGACGTTAGAATCGACGGCGCTGGCGGTGTATCGACTGGCAAGGGAATGAAAGCGTATTTGAAAGAAAGCAGGATACACCTGCTATCGAACGTAAGAGGACAGTATGAGGCTCGTTAA
PROTEIN sequence
Length: 191
MLSKKIRNFLLFGVIAALLLAVGYWNISPERFLDKPVAQVDEGLIDYYATNAYSIQYLPDGKVQYEMTSDKVEHLKASEVSLLTNPDLNLYRGTEFPWHVTSKRGEVNPDGTEVELIDSVRVARTDAQNRDTIITSSRMTVFPQKQYAQTEQDVRIDGAGGVSTGKGMKAYLKESRIHLLSNVRGQYEAR*