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L1_008_000G1_scaffold_17

Search features with annotation key words

Displaying items 61-90 of 251 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_17_61
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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70593..71969
DNA (1377bp) protein (459aa)
fumC_2; class II fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Fumarate hydratase class II n=1 Tax=Pseudomonas sp. CF150 RepID=S6KLK6_9PSED
L1_008_000G1_scaffold_17_62
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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71997..72425
DNA (429bp) protein (143aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BSM0_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_17_63
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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72427..73038
DNA (612bp) protein (204aa)
sodA1; superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase n=3 Tax=Pseudomonas RepID=I2BL64_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_17_64
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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73071..73964
DNA (894bp) protein (298aa)
Metal cation transporter, zinc(II)-iron(II) permease (ZIP) family n=3 Tax=Pseudomonas RepID=I2BN86_PSEFL
metal cation transporter, zinc(II)-iron(II) permease (ZIP) family
Uncharacterized protein {ECO:0000313|EMBL:AFJ55719.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_17_65
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74079..74351)
DNA (273bp) protein (91aa)
Phosphocarrier protein HPr n=3 Tax=Pseudomonas RepID=I2BYU1_PSEFL
ptsH; phosphocarrier protein HPr
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_17_66
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(74368..75225)
DNA (858bp) protein (286aa)
UPF0042 nucleotide-binding protein CFT9_03148 n=2 Tax=Pseudomonas RepID=S6HGC7_9PSED
Hypothetical ATP-binding protein UPF0042, contains P-loop
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_17_67
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75228..75692)
DNA (465bp) protein (155aa)
PTS IIA-like nitrogen-regulatory protein PtsN n=3 Tax=Pseudomonas RepID=I2BNC6_PSEFL
ptsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
PtsN protein {ECO:0000313|EMBL:AFJ55759.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_17_68
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(75703..76008)
DNA (306bp) protein (102aa)
Ribosomal subunit interface protein n=6 Tax=Pseudomonas fluorescens group RepID=E2XLN0_PSEFL
putative sigma-54 modulation protein
Putative sigma(54) modulation protein {ECO:0000313|EMBL:EIK60279.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
L1_008_000G1_scaffold_17_69
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76084..77577)
DNA (1494bp) protein (498aa)
RNA polymerase sigma-54 factor n=3 Tax=Pseudomonas RepID=I2BUE9_PSEFL
rpoN; RNA polymerase sigma-54 factor
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_17_70
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77762..78487)
DNA (726bp) protein (242aa)
Lipopolysaccharide ABC transporter, ATP-binding protein LptB n=4 Tax=Pseudomonas RepID=I2BZU0_PSEFL
lptB; lipopolysaccharide ABC transporter ATP-binding protein LptB
Lipopolysaccharide ABC transporter, ATP-binding protein LptB {ECO:0000313|EMBL:EIK60192.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
L1_008_000G1_scaffold_17_71
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78487..79020)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KLJ7_9PSED
lptA; lipopolysaccharide ABC transporter, periplasmic lipopolysaccharide-binding protein LptA
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_17_72
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79007..79579)
DNA (573bp) protein (191aa)
Lipopolysaccharide ABC transporter, permease protein LptC, putative n=3 Tax=Pseudomonas RepID=I2BMF5_PSEFL
lptC; lipopolysaccharide ABC transporter, permease protein LptC
Lipopolysaccharide export system protein LptC {ECO:0000256|HAMAP-Rule:MF_01915}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_17_73
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79588..80112)
DNA (525bp) protein (175aa)
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45)
KdsC protein {ECO:0000313|EMBL:AFJ54693.1}; EC=3.1.3.45 {ECO:0000313|EMBL:AFJ54693.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=2 Tax=Pseudomonas RepID=I2BKB0_PSEFL
L1_008_000G1_scaffold_17_74
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80113..81087)
DNA (975bp) protein (325aa)
kdsD; arabinose 5-phosphate isomerase (EC:5.3.1.13)
Arabinose 5-phosphate isomerase n=3 Tax=Pseudomonas RepID=I2BRQ7_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_17_75
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81398..82207
DNA (810bp) protein (270aa)
Toluene tolerance ABC efflux transporter, ATP-binding protein n=4 Tax=Pseudomonas RepID=I2BQ60_PSEFL
ttg2A; toluene tolerance ABC efflux transporter, ATP-binding protein
Ttg2A protein {ECO:0000313|EMBL:AFJ56393.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_17_76
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82207..83004
DNA (798bp) protein (266aa)
Toluene tolerance protein Ttg2B n=4 Tax=Pseudomonas RepID=I2BLZ4_PSEFL
ttg2B; toluene tolerance protein Ttg2B
Ttg2B protein {ECO:0000313|EMBL:AFJ55277.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_17_77
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83004..83471
DNA (468bp) protein (156aa)
Toluene tolerance protein Ttg2C n=4 Tax=Pseudomonas RepID=I2BKJ5_PSEFL
ttg2C; toluene tolerance protein Ttg2C
Toluene tolerance protein Ttg2C {ECO:0000313|EMBL:EIK63160.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
L1_008_000G1_scaffold_17_78
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83483..84130
DNA (648bp) protein (216aa)
Toluene tolerance protein Ttg2D n=3 Tax=Pseudomonas RepID=I2BQU2_PSEFL
ttg2D; toluene tolerance protein Ttg2D
Ttg2D protein {ECO:0000313|EMBL:AFJ56625.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_17_79
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84127..84432
DNA (306bp) protein (102aa)
Toluene tolerance protein Ttg2E n=4 Tax=Pseudomonas RepID=I2BSI5_PSEFL
ttg2E; toluene tolerance protein Ttg2E
Toluene tolerance protein Ttg2E {ECO:0000313|EMBL:EIK61815.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
L1_008_000G1_scaffold_17_80
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84547..84786
DNA (240bp) protein (80aa)
Uncharacterized protein n=9 Tax=Pseudomonas RepID=C3K8X3_PSEFS
YrbA protein
BolA family transcriptional regulator {ECO:0000313|EMBL:KGE64383.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;"
L1_008_000G1_scaffold_17_81
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84810..86075
DNA (1266bp) protein (422aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=4 Tax=Pseudomonas RepID=I2BNA3_PSEFL
L1_008_000G1_scaffold_17_82
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86287..86922
DNA (636bp) protein (212aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=463794 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens BBc6R8.;"
ATP phosphoribosyltransferase n=11 Tax=cellular organisms RepID=HIS1_PSEFS
L1_008_000G1_scaffold_17_83
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87051..88367
DNA (1317bp) protein (439aa)
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Pseudomonas sp. CF150 RepID=S6JAW2_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_17_84
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88371..89423
DNA (1053bp) protein (351aa)
hisC_1; histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=2 Tax=Pseudomonas RepID=I2BUR8_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_17_85
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89551..90825)
DNA (1275bp) protein (425aa)
Uracil permease n=4 Tax=Pseudomonas RepID=I2BL51_PSEFL
pyrP; uracil permease
PyrP protein {ECO:0000313|EMBL:AFJ54984.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_17_86
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90828..91466)
DNA (639bp) protein (213aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
Uracil phosphoribosyltransferase n=5 Tax=Pseudomonas RepID=I2BNU5_PSEFL
L1_008_000G1_scaffold_17_87
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91631..92188
DNA (558bp) protein (186aa)
Hypoxanthine phosphoribosyltransferase, putative n=4 Tax=Pseudomonas RepID=I2BV27_PSEFL
hypoxanthine phosphoribosyltransferase
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_17_88
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92192..92659
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6JAV8_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_17_89
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92759..93046
DNA (288bp) protein (96aa)
Uncharacterized protein n=5 Tax=Pseudomonas RepID=I2BRW6_PSEFL
aminopeptidase
Uncharacterized protein {ECO:0000313|EMBL:AFJ56999.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_17_90
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93156..94664)
DNA (1509bp) protein (503aa)
mqo_1; malate:quinone-oxidoreductase (EC:1.1.5.4)
Probable malate:quinone oxidoreductase n=3 Tax=Pseudomonas RepID=I2BLQ4_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
Displaying items 61-90 of 251 in total

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