ggKbase home page

L1_008_000G1_scaffold_497_16

Organism: L1_008_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: comp(12438..14399)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 653.0
  • Bit_score: 1278
  • Evalue 0.0
DNA ligase, NAD-dependent (EC:6.5.1.2) similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 652.0
  • Bit_score: 968
  • Evalue 7.20e-280
DNA ligase n=2 Tax=Clostridium RepID=B6FUK0_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 653.0
  • Bit_score: 1278
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium nexile CAG:348 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1962
ATGGAACAAAAAAAACAGCGTATGCAGGAACTGGTACAATTGCTGAATGAGGCAGGAAAGGCATATTATCAGGGAACTGCGGAGATTATGAGCAACTATGAATATGACAAACTTTACGATGAGTTACTTGCGTTGGAAAAAGAACTGGGAATTACATTGGCATCAAGTCCTACAGTCAATGTAGGATATGAGGTGCTAAGTGAACTTCCGAAAGAACGGCATGAAAAACCGATGCTTTCTTTAGATAAAACGAAGGAAGTGTCGAAATTAAAAGAATTTCTGGGAAGCCAGAAAGCAAGGATTTCCTGGAAATTAGATGGGTTGACCATAGTGCTGACATATCAGAATGGAACTTTACAAAAAGCAGTAACAAGGGGAAATGGAGAGGTCGGAGAGGTTATCACTAACAATGCGAAGGTATTTAAGAACCTGCCGCTTCATATCTCTTATCAGGGAGAATTGATTCTGCGTGGAGAGGCGATCATCGGCTATCGTGATTTTGAAAAAATCAATGAAGAGATTGAAGATGTAGATGCAAAATATAAAAATCCAAGAAATCTGTGCAGCGGTTCAGTACGCCAGTTGAATAATGAGATTACTGCAAAAAGAAATGTGAAGTTCTTCGCATTTTCACTTGTAAAAGCAGATGATGTGGACTTTAAGAATTCCAGAATTTATCAGATGGAATGGTTAAAAGAACAAGGATTTGAAGTGGTGGAAGGATATGAGGTCGCAGCCGGTACGATTGAAGAGCGTGTGAAATTCTTTTCGGAGAAGATTGCAGACAATGATTTTCCGTCAGATGGCCTGGTGCTTGTATATGATGACATTGCATATGGGCAGTCGCTTGGTACAACCTCCAAGTTCCCGAGAGATTCCTTTGCGTTTAAATGGGCAGATGAGATCCGAGAGACGACCCTTCTTGAGATTGAGTGGAGTCCGTCAAGAACAGGGCTTATTAATCCGGTTGCAATTTTTGAACCGGTGGAACTGGAAGGGACGACGGTGAGCCGTGCGAGTGTTCACAATATCAGCATTATGGAAGAATTAGAGCTTGGCATTGGCGATACGATCGCAGTCTATAAAGCAAACATGATCATTCCGCAGATTGCAGAAAACCTGACGCGAAGCGGTGTGAAAGATATTCCTGAGGAATGTCCGGTCTGTCATGGTAAGACAGAGATCCGAAAAGTCAGTGATGCAAAGGCGCTCTACTGTACGAACGAAGAGTGCGGGGCAAAGCATCTGAAATCATTTGCGCTGTTTGTGAGCAGAGATGCGCTTAATATTGATGGACTTTCAGAGGCGACATTAGAGAAATTTATCGCAAAGGGATTTATCAATCATTATTCAGATATTTTTCATCTTGAGCAGTATAAAGATGCGATTAAATCCATGGAAGGATTTGGCGAAAAATCTTATGTAAATCTACAAAAAAGTATTGAAAAAGCACGTGTGACAACACTGCCAAAACTCATTTACAGTCTTGGAATAGCGAATATCGGACTTGCCAACGCAAAGGTAATCTGTAAAGAACTGAACTTTGATATAGAGAAAATGCTTCATGTTACAGAGGAAGAATTGAGTGAAATATCGGGAATCGGTCCTGTGATTGCGAAAGCGTTTGTTTCCTATTTTGCAAAAGAGCAGCATGTGGAAGAATTCCGAAGACTTTTAACAGAATTGGAGATACCAAAGGAAGAAGAGAGCAAAGAGGCTCAGATTTTTGAAAATATGAACTTTGTAATTACAGGAAGTGTGGAACATTTTGCAAATCGAAATGAAGTAAAGGCTGTAATTGAAAGTAAAGGAGGAAAGGTGACGGGCTCTGTCACTTCTAAGACAAACTATCTGATTAATAATGATATAGAGTCAACTTCTTCAAAAAATAAAAAAGCGAGAGAGCTGGGGGTTCCGATTATCTCAGAAGAGACATTTTTAAAAATGCTGGAAGGTGAATAA
PROTEIN sequence
Length: 654
MEQKKQRMQELVQLLNEAGKAYYQGTAEIMSNYEYDKLYDELLALEKELGITLASSPTVNVGYEVLSELPKERHEKPMLSLDKTKEVSKLKEFLGSQKARISWKLDGLTIVLTYQNGTLQKAVTRGNGEVGEVITNNAKVFKNLPLHISYQGELILRGEAIIGYRDFEKINEEIEDVDAKYKNPRNLCSGSVRQLNNEITAKRNVKFFAFSLVKADDVDFKNSRIYQMEWLKEQGFEVVEGYEVAAGTIEERVKFFSEKIADNDFPSDGLVLVYDDIAYGQSLGTTSKFPRDSFAFKWADEIRETTLLEIEWSPSRTGLINPVAIFEPVELEGTTVSRASVHNISIMEELELGIGDTIAVYKANMIIPQIAENLTRSGVKDIPEECPVCHGKTEIRKVSDAKALYCTNEECGAKHLKSFALFVSRDALNIDGLSEATLEKFIAKGFINHYSDIFHLEQYKDAIKSMEGFGEKSYVNLQKSIEKARVTTLPKLIYSLGIANIGLANAKVICKELNFDIEKMLHVTEEELSEISGIGPVIAKAFVSYFAKEQHVEEFRRLLTELEIPKEEESKEAQIFENMNFVITGSVEHFANRNEVKAVIESKGGKVTGSVTSKTNYLINNDIESTSSKNKKARELGVPIISEETFLKMLEGE*