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L1_008_000G1_scaffold_497

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_497_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..288)
DNA (288bp) protein (96aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B6FUI2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80306.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L1_008_000G1_scaffold_497_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(552..1061)
DNA (510bp) protein (170aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FUI4_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA80308.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
antimicrobial peptide ABC transporter ATPase
L1_008_000G1_scaffold_497_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1141..2091)
DNA (951bp) protein (317aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUI5_9CLOT
hypothetical protein
L1_008_000G1_scaffold_497_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2084..2770)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PYM0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23521.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_497_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3024..3278
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FUI8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23520.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Helix-turn-helix.
L1_008_000G1_scaffold_497_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3504..3710
DNA (207bp) protein (69aa)
Cold-shock DNA-binding domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUI9_9CLOT
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EEA80288.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
cold-shock DNA-binding domain-containing protein
L1_008_000G1_scaffold_497_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3881..4615
DNA (735bp) protein (245aa)
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
Transcriptional regulator, Sir2 family n=2 Tax=Clostridium RepID=B6FUJ0_9CLOT
Transcriptional regulator, Sir2 family {ECO:0000313|EMBL:EEA80289.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L1_008_000G1_scaffold_497_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4670..5140)
DNA (471bp) protein (157aa)
Lipoprotein signal peptidase {ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|SAAS:SAAS00112508};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FUJ1_9CLOT
peptidase A8 signal peptidase II
L1_008_000G1_scaffold_497_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5141..5617)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80291.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_497_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5640..7346)
DNA (1707bp) protein (569aa)
Peptidase, S8/S53 family {ECO:0000313|EMBL:EEA80292.1}; EC=3.4.21.- {ECO:0000313|EMBL:EEA80292.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Peptidase, S8/S53 family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUJ3_9CLOT
Subtilase family.
L1_008_000G1_scaffold_497_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7432..8706)
DNA (1275bp) protein (425aa)
Transporter, CPA2 family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUJ4_9CLOT
Transporter, CPA2 family {ECO:0000313|EMBL:EEA80293.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
sodium/proton-potassium antiporter GerN, CPA2 family (TC 2.A.37.2.2)
L1_008_000G1_scaffold_497_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8879..10315)
DNA (1437bp) protein (479aa)
ATP-dependent Clp protease, ATP-binding subunit ClpX n=2 Tax=Clostridium RepID=B6FUJ6_9CLOT
ATP-dependent Clp protease, ATP-binding subunit ClpX {ECO:0000313|EMBL:EEA80295.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
endopeptidase Clp ATP-binding regulatory subunit (clpX)
L1_008_000G1_scaffold_497_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10407..11336)
DNA (930bp) protein (310aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Thioredoxin reductase n=2 Tax=Clostridium RepID=B6FUJ7_9CLOT
hypothetical protein
L1_008_000G1_scaffold_497_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11347..11676)
DNA (330bp) protein (110aa)
Thioredoxin n=2 Tax=Clostridium RepID=R6PYL4_9CLOT
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
trxA; thioredoxin
L1_008_000G1_scaffold_497_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11766..12434)
DNA (669bp) protein (223aa)
Cyclic nucleotide-binding domain protein n=2 Tax=Clostridium RepID=B6FUJ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23510.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
putative transcriptional regulator
L1_008_000G1_scaffold_497_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12438..14399)
DNA (1962bp) protein (654aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=2 Tax=Clostridium RepID=B6FUK0_9CLOT
L1_008_000G1_scaffold_497_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14410..15171)
DNA (762bp) protein (254aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ribosomal large subunit pseudouridine synthase F (EC:5.4.99.- 5.4.99.12)
Pseudouridine synthase n=2 Tax=Clostridium RepID=B6FUK1_9CLOT
L1_008_000G1_scaffold_497_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15180..16472)
DNA (1293bp) protein (431aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Aspartyl aminopeptidase (EC:3.4.11.21)
M18 family aminopeptidase n=2 Tax=Clostridium RepID=B6FUK2_9CLOT
L1_008_000G1_scaffold_497_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16584..17912
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PYL2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23506.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
MATE efflux family protein
L1_008_000G1_scaffold_497_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17909..18397
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PJ18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23505.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_497_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18479..18886)
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FVK6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23504.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_497_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18950..19339)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUK5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80274.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L1_008_000G1_scaffold_497_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19361..19663)
DNA (303bp) protein (101aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUK6_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEA80275.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_497_24
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19686..20135)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUK7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80276.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_497_25
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20181..20675)
DNA (495bp) protein (165aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUK8_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEA80277.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
acetyltransferase
L1_008_000G1_scaffold_497_26
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20763..22823)
DNA (2061bp) protein (687aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUK9_9CLOT
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EEA80278.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Molecular chaperone, HSP90 family
L1_008_000G1_scaffold_497_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22981..26226)
DNA (3246bp) protein (1082aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PGP7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23498.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted permease.
L1_008_000G1_scaffold_497_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26233..26937)
DNA (705bp) protein (235aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FUL1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23497.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC-type antimicrobial peptide transport system, ATPase component
L1_008_000G1_scaffold_497_29
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27105..27605
DNA (501bp) protein (167aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridium RepID=B6FUL2_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEA80281.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
C_GCAxxG_C_C family protein
L1_008_000G1_scaffold_497_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27640..28650)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FUL3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80282.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
Displaying items 1-30 of 51 in total

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