ggKbase home page

L1_008_000G1_scaffold_574_30

Organism: L1_008_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: 37883..41530

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 1215.0
  • Bit_score: 2394
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 1221.0
  • Bit_score: 2241
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SJV4_CLOSY similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 1215.0
  • Bit_score: 2394
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. 7_3_54FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3648
ATGCCAGAGACAAACGAAACTTATCAGCCATTGACATTTGACGCAATCAAGATTGGTTTGGCCTCCCCTGAGAAGATCCTTGAGTGGTCCCACGGCGAGGTGAAAAAGCCGGAGACCATCAACTATAGAACCTTAAAGCCGGAGAAAGACGGTCTGTTCTGTGAGAAGATCTTCGGGCCGAGCAAGGATTGGGAGTGCCATTGTGGTAAATATAAAAAAATCAGATATAAAGGTGTAATCTGTGACCGATGCGGCGTAGAAGTAACGAAAGCCAGTGTCCGCAGGGAGCGCGTGGGCCATATTGCCCTCGCGGCGCCTGTTTCCCATATCTGGTACTTCAAGGGAATCCCCAGCCGTATGGGACTGATTCTCGATATATCTCCGAGAACACTGGAAAAGGTTCTGTACTTTGCTTCTTATATCGTACTGGATCCGGGCAAAACAAGCCTCCAGTACAAACAGGTATTATCCGAGAAGGAGTACCGCGATGAGCTGGAGAAATACGGCTACGGCAACTTCCGTGTAGGAATGGGAGCCGAGGCCATTCAGGAACTTTTACAGGCCATTAATCTGGAAAAGGATTCTGAGGATTTGAGAAAACAGCTCAAAGATGCCACAGGCCAGAAGCGCGCCCGTATCATCAAGAGGCTGGAAGTGGTCGAGGCCTTCAGAAATTCCGGCAACAAACCGGAGTGGATGATTATGACCGTAGTTCCGGTAATTCCTCCGGATATCCGTCCTATGGTACAGCTGGACGGCGGCCGTTTTGCAACATCTGACTTAAACGACTTATATAGAAGAATTATCAACCGTAACAACCGTCTTGCCCGTCTTCTGGAACTGGGCGCTCCCGACATCATTGTCAGGAACGAGAAACGTATGCTCCAGGAGGCTGTCGACGCACTCATCGACAACGGCAGACGAGGCAGGCCTGTGACAGGACCTGGAAACAGAGCTTTAAAATCCCTCTCCGATATGTTAAAGGGTAAACAGGGCCGTTTCCGCCAGAACCTTCTGGGTAAACGAGTTGACTATTCGGGACGTTCCGTTATCGTAGTTGGACCGGAACTGAAGATTTACCAGTGCGGCCTTCCGAAGGAGATGGCGATTGAGCTGTTCAAGCCTTTTGTTATGAAAGAGCTTGTCTCCAACGGAACCGCACACAATATCAAGAACGCGAAGAAGATGGTAGAGCGTCTCCAGCCGGAAGTTTGGGATGTGCTGGAGGATGTTATTAAAGAGCATCCGGTTATGTTAAACCGCGCGCCTACTCTGCACAGACTTGGTATCCAGGCCTTTGAGCCGATTCTGGTAGAAGGTAAGGCAATCAAGCTTCATCCCCTTGTTTGTACTGCGTTCAACGCCGACTTTGACGGTGACCAGATGGCTGTTCATCTGCCGCTGTCCGTAGAGGCCCAGGCAGAGTGCCGTTTCCTTTTACTGTCTCCGAACAACCTGTTAAAACCGTCCGACGGCGGCCCTGTAGCCGTTCCTTCACAGGATATGGTACTCGGTATCTACTATCTGACACAGGAGAGACCGGGAGCAAAGGGCGAAGGCATGGCCTTCAAGAGTGTTAATGAGGCAATTCTCGCTTATGAGAACGGCGAAGTTACCCTTCACTCAAAAGTAAAGGTGAGAGTGCAGAAGAGAATGCCTGACGGTACGGTTAAGACCGGCATCATCGAGTCCACCGTAGGCCGCTTCATTTTCAATGAGATTATTCCGCAGGATCTCGGTTTTGTGGACAGAAGCATTGAAGAGAATGAATTAAAGCTGGAAATAGACTTCCACGTAGGCAAGAAGCAGTTAAAACAGATTCTTGAGAAAGTTATCAATATTCACGGCGCAACACAGACTGCCGTGACACTTGACGATATTAAGGCAATTGGTTACAAATACTCCACAAGGGCGGCCATGACCGTATCAATTTCCGATATGACCGTGCCTGAGAGCAAAAAGCAGCTGATTGAAGATGCACAGTCTACCGTTGACCAGATTGCCAAGAACTTCCGCCGTGGTCTCATCACAGAGGAGGAGCGTTACAAAGAGGTTATCGAGACATGGAAGGCTACCGATGATCAGCTGACTCATGACCTGTTAACCGGACTTGACAAGTATAATAACATCTATATGATGGCTGACTCCGGAGCCCGTGGTTCCGATAAACAGATTAAACAGCTGGCAGGTATGCGTGGACTTATGGCAGATACAACAGGCCATACCATCGAACTTCCTATCAAGTCCAACTTCCGTGAAGGCCTTGACGTACTGGAGTACTTCATCTCTGCCCACGGAGCGCGTAAAGGTCTGTCAGATACGGCGCTTCGTACGGCCGACTCAGGTTACCTGACAAGACGTCTTGTTGACGTTTCCCAGGATCTGATCGTACGTGAAGAGGACTGCTGTGAAGGAAGAGAAATCCCATTCATGGAGATTAAAGGCTTCATGGACGGCCAGGAGACAATCGAGGCCCTGGAAGAGCGAATCACAGGCCGTTTTATCGCCGAGACGATCACAGATCCTGATACAGGGGAAGTCATTGTCAAGGCAAACCATATGTGTACGCCGAAGCGTGCGGCTGCCGTTATGGCAGTGCTTAGGAAACAGGGCAGGGACAGCGTGAAAATCCGTACCGTCTTAACCTGTAAATCCCATATCGGTGTGTGTGCGAAGTGCTACGGCGCCAACATGGCGACCGGCCAGCCGGTTCAGGTTGGCGAGGCGGTTGGTATTATCGCTGCTCAGTCCATCGGTGAGCCTGGTACACAGCTTACAATGCGTACGTTCCATACGGGCGGCGTTGCCGGCGGCGATATCACACAGGGTCTTCCCCGTGTCGAGGAGCTTTTCGAGGCGCGTAAGCCGAAAGGACTCGCAATTATTGCAGAGTTCGGCGGAATTGCGACGATCAAGGATACAAAGAAGAAACGTGAGATTATTATCACGGACAATGAGACTGGTAATTCCAAGACTTACCTGATTCCTTACGGGTCCAGAATCAAGATTCAGGACGGTTCCTTACTTGAGGCCGGTGACGAGCTGACCGAAGGTAGCGTGAATCCGCATGACATTCTGAAGATTAAGGGTGTCCGCGCCGTTCAGGACTACATGATTCAGGAGGTTCAGCGAGTTTACCGTCTTCAGGGTGTAGAAATCAACGATAAGCATATCGAGATGATTGTGCGCCAGATGCTGAAGAAGATTAAGATAGAGGAGAGCGGAGATTCCGATGTGCTTCCGGGAACCTCCATGGACGTTCTGGATTACAATGATATGAACGAGGCTCTGCTTGCAGAAGGCAAAGAACCGGCAATCGGCCGTCAGGTTATGCTCGGTATCACAAAAGCTTCTCTGGCTACAGATTCCTTCTTATCGGCCGCTTCCTTCCAGGAGACGACAAAAGTTCTTACAGAGGCCGCTATCAACGGTAAAGTGGATCATCTGATTGGACTGAAGGAGAACGTTATTATCGGTAAACTGATTCCGGCCGGTACTGGTATGAAGAGATACCGTTCCATTAAGCTGAATACCGATATGGAAGAAGAGGATGAGATTATGCTGGCTGACGACGATGATATCGATCTGGATATTCTCGACGAGGCAGACAGAATTGTCCTGAATGAAGATGAATTAAGCGAAGAGTAA
PROTEIN sequence
Length: 1216
MPETNETYQPLTFDAIKIGLASPEKILEWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPSKDWECHCGKYKKIRYKGVICDRCGVEVTKASVRRERVGHIALAAPVSHIWYFKGIPSRMGLILDISPRTLEKVLYFASYIVLDPGKTSLQYKQVLSEKEYRDELEKYGYGNFRVGMGAEAIQELLQAINLEKDSEDLRKQLKDATGQKRARIIKRLEVVEAFRNSGNKPEWMIMTVVPVIPPDIRPMVQLDGGRFATSDLNDLYRRIINRNNRLARLLELGAPDIIVRNEKRMLQEAVDALIDNGRRGRPVTGPGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKIYQCGLPKEMAIELFKPFVMKELVSNGTAHNIKNAKKMVERLQPEVWDVLEDVIKEHPVMLNRAPTLHRLGIQAFEPILVEGKAIKLHPLVCTAFNADFDGDQMAVHLPLSVEAQAECRFLLLSPNNLLKPSDGGPVAVPSQDMVLGIYYLTQERPGAKGEGMAFKSVNEAILAYENGEVTLHSKVKVRVQKRMPDGTVKTGIIESTVGRFIFNEIIPQDLGFVDRSIEENELKLEIDFHVGKKQLKQILEKVINIHGATQTAVTLDDIKAIGYKYSTRAAMTVSISDMTVPESKKQLIEDAQSTVDQIAKNFRRGLITEEERYKEVIETWKATDDQLTHDLLTGLDKYNNIYMMADSGARGSDKQIKQLAGMRGLMADTTGHTIELPIKSNFREGLDVLEYFISAHGARKGLSDTALRTADSGYLTRRLVDVSQDLIVREEDCCEGREIPFMEIKGFMDGQETIEALEERITGRFIAETITDPDTGEVIVKANHMCTPKRAAAVMAVLRKQGRDSVKIRTVLTCKSHIGVCAKCYGANMATGQPVQVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGGDITQGLPRVEELFEARKPKGLAIIAEFGGIATIKDTKKKREIIITDNETGNSKTYLIPYGSRIKIQDGSLLEAGDELTEGSVNPHDILKIKGVRAVQDYMIQEVQRVYRLQGVEINDKHIEMIVRQMLKKIKIEESGDSDVLPGTSMDVLDYNDMNEALLAEGKEPAIGRQVMLGITKASLATDSFLSAASFQETTKVLTEAAINGKVDHLIGLKENVIIGKLIPAGTGMKRYRSIKLNTDMEEEDEIMLADDDDIDLDILDEADRIVLNEDELSEE*