ggKbase home page

L1_008_000G1_scaffold_32_192

Organism: L1_008_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: comp(223817..224812)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 331.0
  • Bit_score: 649
  • Evalue 1.40e-183
DNA-directed RNA polymerase subunit alpha n=4 Tax=Bifidobacterium dentium RepID=D2Q8J6_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 331.0
  • Bit_score: 649
  • Evalue 1.00e-183
polA; polA DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 331.0
  • Bit_score: 649
  • Evalue 2.90e-184

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium dentium → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 996
GTGCTTATCGCACAGCGTCCGACACTTACCGAGGAATCTCTCAACCCTCAGCGTTCCCGCTTCACCATCGAGCCTCTCGAGCCTGGTTTCGGCTACACGCTTGGCAACTCGCTGCGCCGTACCCTCCTGAGCTCCATTCCTGGAGCGGCTGTGACTTCGGTGCGTATCTCCGGCGTCCCGCATGAGTTCACCACTCTGCCGGGTGTTGAAGAGGACGTTACCGAGATCCTGCTGAACATCAAGGGCATCGTGCTCACCAGCGAATACGATGAGCCGGTTGTCATGTATCTGCGCAAGAGCGGCAAGGGCGAAGCCACCGCGGGTGATATCACCCCGCCGGCCGGCGTCACCATCGCCAACCCGGATATGCATATCGCGTCCCTCGCCGATGATGGCGAACTCGAGATCGAGTTCACCGTCGAGCGTGGCCGCGGTTACGTTCCCGCTCAGATGAACAAGCAGGACAACGCCGAGATCGGCCGTATCCCGGTTGATTCGATTTACTCCCCGGTGCTCAAGGTGAGCTATCGCGTGGAAGCCACCCGCGTTGAACAGCGCACTGACTTCGACAAGCTCATCCTGGACGTGGAGACCAAGCCGGCAATCTCCCCGCGTGATGCAGTCGCATCCGCTGGTTCCACCTTGGTGGAGCTCTTCGGCCTGTGCCGTGAGCTCAACACCCAGGCCGAAGGCGTCGAGGTCGGCCCTGCCCCGGTGGCAGAGGAGACCAACCCGGAGATGGCCGTTCCGATCGAGGACCTCAACCTCACTCAGCGTAGCTACAACTGCCTGAAGCGCGAGGGCATCCACACGATCGGTGAGCTGGTCGCCCACACCGAGCAGGATCTGCTCGACATCCGCAATTTCGGCATGAAGTCCATCGACGAAGTCAAGGAAAAGTTGCAGGCTCTTGGCCTGGCTCTCAAGGCTTCGCCGCTCGGTTTCGATGCCAACAACCTCGAAGGCGGCACCTTCTTCTCGCCGGAAGACGAGTGA
PROTEIN sequence
Length: 332
VLIAQRPTLTEESLNPQRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRISGVPHEFTTLPGVEEDVTEILLNIKGIVLTSEYDEPVVMYLRKSGKGEATAGDITPPAGVTIANPDMHIASLADDGELEIEFTVERGRGYVPAQMNKQDNAEIGRIPVDSIYSPVLKVSYRVEATRVEQRTDFDKLILDVETKPAISPRDAVASAGSTLVELFGLCRELNTQAEGVEVGPAPVAEETNPEMAVPIEDLNLTQRSYNCLKREGIHTIGELVAHTEQDLLDIRNFGMKSIDEVKEKLQALGLALKASPLGFDANNLEGGTFFSPEDE*