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L1_008_000G1_scaffold_29_56

Organism: L1_008_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: comp(52532..53356)

Top 3 Functional Annotations

Value Algorithm Source
tRNA 2-thiocytidine biosynthesis protein TtcA n=3 Tax=Pseudomonas RepID=I2BTF1_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 274.0
  • Bit_score: 551
  • Evalue 4.00e-154
ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 274.0
  • Bit_score: 551
  • Evalue 1.10e-154
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 274.0
  • Bit_score: 551
  • Evalue 5.70e-154

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGGGCACTCTTACAGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGCCTGGCCGGTGAAGCGGTCGCCGATTTCAATATGATCGAGGACGGCGACAAGGTCATGGTCTGCCTCTCCGGCGGCAAAGACAGCTACACCATGCTCGACGTGTTGCTGCACCTGCAAAAGGTCGCGCCGATCAAGTTCGAGATCGTGGCGGTCAACATGGACCAGAAACAACCCGGTTTCCCTGAGCATGTGCTGCCGGCCTATTTGAAAGAACTGGGCGTGGAGTACCACATTGTCGAGAAAGACACCTACTCGGTGGTCAAGGAATTGATCCCGGAAGGCAAGACCACCTGCTCGCTGTGCTCGCGCCTGCGCCGTGGCACGCTCTATACCTTTGCCGATGAGATCGGCGCGACCAAGATGGCCTTGGGTCATCACCGCGATGACATCGTCGAAACCTTCTTCCTCAATATGTTCTTCAACGGCTCGCTCAAGGCCATGCCGCCCAAGCTGCGTGCCGATGATGGGCGCAACGTGGTGATCCGCCCGCTGGCGTATTGCAACGAGAAGGACATCCAGGCTTATTCCGACTTCAAGCAATTCCCGATCATCCCGTGCAACCTGTGCGGCTCCCAGGAAAACCTGCAGCGCCAGGTGGTCAAGGAGATGCTGGTGGACTGGGAGCGCAAGACCCCGGGGCGTACCGAAAGTATCTTCCGCAGCCTGCAAAACGTGATCCCGTCGCAATTGGCCGACCGCAACCTGTTTGACTTCACCAGCTTGAAAATCGATGAGACCGCCGCATCGCGTTTCGTCAATGTAGTGAACCTCTGA
PROTEIN sequence
Length: 275
MGTLTVNQNKLQKRLRRLAGEAVADFNMIEDGDKVMVCLSGGKDSYTMLDVLLHLQKVAPIKFEIVAVNMDQKQPGFPEHVLPAYLKELGVEYHIVEKDTYSVVKELIPEGKTTCSLCSRLRRGTLYTFADEIGATKMALGHHRDDIVETFFLNMFFNGSLKAMPPKLRADDGRNVVIRPLAYCNEKDIQAYSDFKQFPIIPCNLCGSQENLQRQVVKEMLVDWERKTPGRTESIFRSLQNVIPSQLADRNLFDFTSLKIDETAASRFVNVVNL*