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L1_008_000G1_scaffold_29

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Displaying items 31-60 of 208 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_29_31
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31693..31890)
DNA (198bp) protein (66aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BUG6_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_32
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31983..32384)
DNA (402bp) protein (134aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BZX8_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_33
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32514..32930)
DNA (417bp) protein (139aa)
Inhibitor of vertebrate lysozyme family protein n=3 Tax=Pseudomonas RepID=I2BWD8_PSEFL
inhibitor of vertebrate lysozyme family protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_34
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33277..34053
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CFT9 RepID=S6IZL7_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_35
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34364..35035
DNA (672bp) protein (224aa)
Membrane protein, YccA family n=5 Tax=Pseudomonas RepID=I2BWC6_PSEFL
membrane protein, YccA family
Membrane protein, YccA family {ECO:0000313|EMBL:EIK61710.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
L1_008_000G1_scaffold_29_36
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35105..36124)
DNA (1020bp) protein (340aa)
murB_1; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Pseudomonas sp. CF150 RepID=S6IX16_9PSED
L1_008_000G1_scaffold_29_37
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36121..36585)
DNA (465bp) protein (155aa)
Low molecular weight phosphotyrosine protein phosphatase n=2 Tax=Pseudomonas RepID=I2BL09_PSEFL
low molecular weight phosphotyrosine protein phosphatase
Uncharacterized protein {ECO:0000313|EMBL:AFJ54942.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_29_38
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36585..37349)
DNA (765bp) protein (255aa)
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=3 Tax=Pseudomonas RepID=I2BXI5_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_39
Pseudomonas sp. RIT288, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37346..37531)
DNA (186bp) protein (62aa)
UPF0434 protein PFLU_3771 n=20 Tax=Pseudomonas RepID=Y3771_PSEFS
hypothetical protein
UPF0434 protein BW33_02124 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=1470589 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. RIT288.;"
L1_008_000G1_scaffold_29_40
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37556..38566)
DNA (1011bp) protein (337aa)
lpxK; tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4K918_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_41
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38566..38994)
DNA (429bp) protein (143aa)
Transport energizing protein, ExbD/TolR family n=3 Tax=Pseudomonas RepID=I2BTV1_PSEFL
transport energizing protein, ExbD/TolR family
Uncharacterized protein {ECO:0000313|EMBL:AFJ57684.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_29_42
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38991..39626)
DNA (636bp) protein (212aa)
Transporter, MotA/TolQ/ExbB proton channel family n=4 Tax=Pseudomonas RepID=I2BUM1_PSEFL
transporter, MotA/TolQ/ExbB proton channel family
Transporter, MotA/TolQ/ExbB proton channel family {ECO:0000313|EMBL:EIK63334.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
L1_008_000G1_scaffold_29_43
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39735..41960)
DNA (2226bp) protein (742aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6ISU9_9PSED
Uncharacterized protein {ECO:0000313|EMBL:AFJ56057.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
DNA internalization-related competence protein ComEC/Rec2
L1_008_000G1_scaffold_29_44
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42096..42611
DNA (516bp) protein (172aa)
Uncharacterized protein n=4 Tax=Pseudomonas RepID=I2BN10_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ55643.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_29_45
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42615..43973)
DNA (1359bp) protein (453aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Sensor histidine kinase n=3 Tax=Pseudomonas RepID=I2BZ68_PSEFL
sensor histidine kinase
L1_008_000G1_scaffold_29_46
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43960..44688)
DNA (729bp) protein (243aa)
DNA-binding response regulator n=3 Tax=Pseudomonas RepID=I2BTS5_PSEFL
DNA-binding response regulator
Uncharacterized protein {ECO:0000313|EMBL:AFJ57658.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_29_47
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44894..47647
DNA (2754bp) protein (918aa)
gacS; sensor protein GacS (EC:2.7.13.3)
Sensor protein GacS n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4K5P7_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_48
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47703..48692
DNA (990bp) protein (330aa)
ldhA; D-lactate dehydrogenase (EC:1.1.1.28)
LdhA protein {ECO:0000313|EMBL:AFJ58415.1}; EC=1.1.1.28 {ECO:0000313|EMBL:AFJ58415.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
D-lactate dehydrogenase n=2 Tax=Pseudomonas RepID=I2BVY2_PSEFL
L1_008_000G1_scaffold_29_49
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48764..49204
DNA (441bp) protein (147aa)
Uncharacterized protein n=4 Tax=Pseudomonas RepID=I2BRJ9_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIK58810.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
L1_008_000G1_scaffold_29_50
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49201..49605
DNA (405bp) protein (135aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BK52_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ54635.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_29_51
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49738..50199)
DNA (462bp) protein (154aa)
AhpC/TSA family antioxidant protein (EC:1.11.1.15)
Antioxidant, AhpC/TSA family n=4 Tax=Pseudomonas RepID=I2BM69_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_52
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50315..50668
DNA (354bp) protein (118aa)
arsC; arsenate reductase (glutaredoxin) (EC:1.20.4.1)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Arsenate reductase (Glutaredoxin) n=3 Tax=Pseudomonas RepID=I2BXP9_PSEFL
L1_008_000G1_scaffold_29_53
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50665..51279
DNA (615bp) protein (205aa)
wrbA; NAD(P)H:quinone oxidoreductase, type IV (EC:1.6.5.2)
NAD(P)H dehydrogenase (quinone) {ECO:0000256|SAAS:SAAS00064138}; EC=1.6.5.2 {ECO:0000256|SAAS:SAAS00064138};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
NAD(P)H:quinone oxidoreductase, type IV n=3 Tax=Pseudomonas RepID=I2BZV2_PSEFL
L1_008_000G1_scaffold_29_54
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51263..51667
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CFT9 RepID=S6IZC1_9PSED
membrane protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_55
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51793..52464)
DNA (672bp) protein (224aa)
tag_2; DNA-3-methyladenine glycosylase 1 (EC:3.2.2.20)
DNA-3-methyladenine glycosylase 1 n=3 Tax=Pseudomonas RepID=I2BML3_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_56
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52532..53356)
DNA (825bp) protein (275aa)
tRNA 2-thiocytidine biosynthesis protein TtcA n=3 Tax=Pseudomonas RepID=I2BTF1_PSEFL
ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_57
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53719..54321
DNA (603bp) protein (201aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BVE7_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_58
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54450..54944
DNA (495bp) protein (165aa)
Protein SprT n=5 Tax=Pseudomonas RepID=I2BPW1_PSEFL
SprT family metallopeptidase
Protein SprT {ECO:0000256|HAMAP-Rule:MF_00746, ECO:0000256|SAAS:SAAS00012266}; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
L1_008_000G1_scaffold_29_59
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55038..56213)
DNA (1176bp) protein (392aa)
CoA-transferase, family III n=2 Tax=Pseudomonas RepID=I2BS69_PSEFL
CoA-transferase, family III
Uncharacterized protein {ECO:0000313|EMBL:AFJ57102.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_29_60
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56371..56763
DNA (393bp) protein (131aa)
tusD; sulfur relay protein TusD (EC:2.8.1.-)
Sulfur relay protein TusD {ECO:0000313|EMBL:EIK60600.1}; EC=2.8.1.- {ECO:0000313|EMBL:EIK60600.1};; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
Sulfur relay protein TusD n=4 Tax=Pseudomonas RepID=I2BLL0_PSEFL
Displaying items 31-60 of 208 in total

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