ggKbase home page

L1_008_000G1_scaffold_29

Search features with annotation key words

Displaying items 91-120 of 208 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_29_91
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89073..89570
DNA (498bp) protein (166aa)
NADH-ubiquinone oxidoreductase chain E (EC:1.6.5.3)
NADH-ubiquinone oxidoreductase chain E {ECO:0000313|EMBL:AKA81457.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AKA81457.1};; NuoE protein {ECO:0000313|EMBL:KIR24104.1}; EC=1.6.99.5 {ECO:0000313|EMBL:KIR24104.1};; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
NADH-quinone oxidoreductase, E subunit n=5 Tax=Pseudomonas RepID=I2BZZ6_PSEFL
L1_008_000G1_scaffold_29_92
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89567..90922
DNA (1356bp) protein (452aa)
NADH-ubiquinone oxidoreductase chain F (EC:1.6.5.3)
NADH-quinone oxidoreductase, F subunit {ECO:0000313|EMBL:EIK71832.1}; EC=1.6.99.5 {ECO:0000313|EMBL:EIK71832.1};; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
NADH-quinone oxidoreductase, F subunit n=3 Tax=Pseudomonas RepID=I2BNN2_PSEFL
L1_008_000G1_scaffold_29_93
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91058..93772
DNA (2715bp) protein (905aa)
NADH-quinone oxidoreductase {ECO:0000256|RuleBase:RU003525}; EC=1.6.5.11 {ECO:0000256|RuleBase:RU003525};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
nuoG; NADH-quinone oxidoreductase, G subunit (EC:1.6.99.5)
NADH-quinone oxidoreductase n=2 Tax=Pseudomonas RepID=I2BLV6_PSEFL
L1_008_000G1_scaffold_29_94
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93769..94776
DNA (1008bp) protein (336aa)
NADH:ubiquinone oxidoreductase subunit H (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; TaxID=746360 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens WH6.;"
NADH-quinone oxidoreductase subunit H n=5 Tax=Pseudomonas RepID=E2XUA5_PSEFL
L1_008_000G1_scaffold_29_95
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94788..95336
DNA (549bp) protein (183aa)
nuoI; NADH-quinone oxidoreductase, I subunit (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
NADH-quinone oxidoreductase subunit I n=3 Tax=Pseudomonas RepID=I2BXY1_PSEFL
L1_008_000G1_scaffold_29_96
Pseudomonas sp. TKP, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95346..95849
DNA (504bp) protein (168aa)
NADH-ubiquinone oxidoreductase chain J (EC:1.6.5.3)
NADH:ubiquinone oxidoreductase subunit J {ECO:0000313|EMBL:AHC36544.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AHC36544.1};; TaxID=1415630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. TKP.;"
NADH dehydrogenase I chain J n=8 Tax=Pseudomonas RepID=C3JY89_PSEFS
L1_008_000G1_scaffold_29_97
Pseudomonas sp. FH4, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95852..96160
DNA (309bp) protein (103aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; TaxID=1284393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FH4.;"
NADH-quinone oxidoreductase subunit K n=10 Tax=Pseudomonas RepID=NUOK_PSEFS
nuoK; NADH-quinone oxidoreductase subunit K
L1_008_000G1_scaffold_29_98
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96157..98010
DNA (1854bp) protein (618aa)
NuoL protein {ECO:0000313|EMBL:AFJ56284.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AFJ56284.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
nuoL; NADH-quinone oxidoreductase, L subunit (EC:1.6.99.5)
NADH-quinone oxidoreductase, L subunit n=3 Tax=Pseudomonas RepID=I2BPV1_PSEFL
L1_008_000G1_scaffold_29_99
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98066..99598
DNA (1533bp) protein (511aa)
nuoM; NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
NADH-quinone oxidoreductase, M subunit n=3 Tax=Pseudomonas RepID=I2BZY5_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_100
Pseudomonas sp. RIT357, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99606..101069
DNA (1464bp) protein (488aa)
nuoN; NADH-quinone oxidoreductase subunit N (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=1470593 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. RIT357.;"
NADH-quinone oxidoreductase subunit N n=4 Tax=Pseudomonas RepID=E2XUB2_PSEFL
L1_008_000G1_scaffold_29_101
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101347..102099)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KBZ7_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ59386.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_29_102
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102225..103058)
DNA (834bp) protein (278aa)
N-hydroxyarylamine O-acetyltransferase (EC:2.3.1.118)
N-hydroxyarylamine O-acetyltransferase n=1 Tax=Pseudomonas sp. CF150 RepID=S6J688_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_103
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103179..103415
DNA (237bp) protein (79aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BVG5_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ58248.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_29_104
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103446..103640)
DNA (195bp) protein (65aa)
Uncharacterized protein n=4 Tax=Pseudomonas RepID=I2BT87_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ57470.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_29_105
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103653..103832)
DNA (180bp) protein (60aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BLS8_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ55211.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_29_106
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103947..104468
DNA (522bp) protein (174aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BMY4_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ55617.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_29_107
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104499..105359)
DNA (861bp) protein (287aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=S6IZ51_9PSED
Dyp-type peroxidase family protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_108
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105498..107114
DNA (1617bp) protein (539aa)
Uncharacterized protein {ECO:0000313|EMBL:AFJ59801.1}; EC=1.2.1.- {ECO:0000313|EMBL:AFJ59801.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
aldehyde dehydrogenase (NAD) family protein (EC:1.2.1.-)
Putative NADP-dependent glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Pseudomonas sp. CF150 RepID=S6IYG7_9PSED
L1_008_000G1_scaffold_29_109
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107206..108339
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6J175_9PSED
membrane protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_110
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108466..112209)
DNA (3744bp) protein (1248aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KLD9_9PSED
Uncharacterized protein {ECO:0000313|EMBL:AFJ58648.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
hypothetical protein
L1_008_000G1_scaffold_29_111
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112624..113355)
DNA (732bp) protein (244aa)
Transcriptional regulator, TetR family n=3 Tax=Pseudomonas RepID=I2BTE1_PSEFL
TetR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AFJ57524.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_29_112
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113711..114418
DNA (708bp) protein (236aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6J6A2_9PSED
ABC transporter ATP-binding protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_113
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114415..115614
DNA (1200bp) protein (400aa)
Efflux ABC transporter, permease protein n=2 Tax=Pseudomonas RepID=I2BX15_PSEFL
efflux ABC transporter permease
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_114
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115607..117085
DNA (1479bp) protein (493aa)
Outer membrane efflux protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BZ11_PSEFL
outer membrane efflux protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_115
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117075..118328
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KLE4_9PSED
auxiliary transport protein, membrane fusion protein family
Uncharacterized protein {ECO:0000313|EMBL:AFJ57447.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_29_116
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118431..119825)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=I2BUC5_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_117
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(119848..120411)
DNA (564bp) protein (188aa)
DNA-binding domain/cupin domain protein n=2 Tax=Pseudomonas RepID=I2BV16_PSEFL
DNA-binding domain/cupin domain protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ58099.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_29_118
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120504..121433
DNA (930bp) protein (310aa)
Putative integral membrane protein n=2 Tax=Pseudomonas RepID=S6GZA5_9PSED
Permease of the drug/metabolite transporter (DMT) superfamily
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_119
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121639..124560
DNA (2922bp) protein (974aa)
Monovalent cation/proton antiporter, MnhAB/PhaAB subunit n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4K498_PSEFL
Monovalent cation/proton antiporter, MnhAB/PhaAB subunit {ECO:0000313|EMBL:EIK59538.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
monovalent cation/proton antiporter, MnhAB/PhaAB subunit
L1_008_000G1_scaffold_29_120
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124560..124904
DNA (345bp) protein (115aa)
Monovalent cation/proton antiporter, MnhC/PhaC subunit n=11 Tax=Pseudomonas RepID=I2BR33_PSEFL
cation:proton antiporter
Monovalent cation/H+ antiporter subunit C {ECO:0000313|EMBL:ELQ18365.1}; TaxID=1205750 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens BRIP34879.;"
Displaying items 91-120 of 208 in total

View Taxonomy