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L1_008_000G1_scaffold_29

Search features with annotation key words

Displaying items 61-90 of 208 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_29_61
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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56765..57115
DNA (351bp) protein (117aa)
Sulfur relay protein TusC n=3 Tax=Pseudomonas RepID=I2BNS5_PSEFL
tusC; sulfur relay protein TusC
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_62
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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57115..57393
DNA (279bp) protein (93aa)
tusB; sulfur relay protein TusB (EC:2.8.-.-)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6K4K1_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_63
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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57390..57725
DNA (336bp) protein (112aa)
tusE; sulfurtransferase (EC:2.8.1.-)
Sulfurtransferase n=2 Tax=Pseudomonas RepID=I2BKF2_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_64
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57722..58723
DNA (1002bp) protein (334aa)
Glycosyl transferase, putative n=2 Tax=Pseudomonas RepID=I2BR02_PSEFL
glycosyl transferase
Uncharacterized protein {ECO:0000313|EMBL:AFJ56685.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_29_65
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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58812..59807
DNA (996bp) protein (332aa)
Glutathione S-transferase domain-containing protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6IQU0_9PSED
glutathione S-transferase, C-terminal domain protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_66
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59914..61308)
DNA (1395bp) protein (465aa)
cobA; siroheme synthase (EC:2.1.1.107 1.3.1.76 4.99.1.4)
Siroheme synthase n=2 Tax=Pseudomonas RepID=I2BPS7_PSEFL
Siroheme synthase {ECO:0000256|HAMAP-Rule:MF_01646}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_29_67
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61309..62589)
DNA (1281bp) protein (427aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=2 Tax=Pseudomonas RepID=S6HJY2_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_68
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(62605..62979)
DNA (375bp) protein (125aa)
Putative fluoride ion transporter CrcB n=3 Tax=Pseudomonas RepID=I2BMT1_PSEFL
crcB; CrcB protein
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_29_69
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62976..64301)
DNA (1326bp) protein (442aa)
Recombination factor protein RarA n=4 Tax=Pseudomonas RepID=I2BT94_PSEFL
recombination factor protein RarA
Uncharacterized protein {ECO:0000313|EMBL:AFJ57477.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_29_70
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64325..64948)
DNA (624bp) protein (208aa)
Outer-membrane lipoprotein carrier protein n=5 Tax=Pseudomonas RepID=E2XU81_PSEFL
Outer membrane lipoprotein carrier protein LolA
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_71
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65003..67411)
DNA (2409bp) protein (803aa)
DNA translocase FtsK n=3 Tax=Pseudomonas RepID=I2BM41_PSEFL
FtsK protein {ECO:0000313|EMBL:AFJ55324.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
ftsK; DNA translocase FtsK
L1_008_000G1_scaffold_29_72
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67884..68564
DNA (681bp) protein (227aa)
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase n=3 Tax=Pseudomonas RepID=I2BKH9_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_73
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68621..69328
DNA (708bp) protein (236aa)
arginine-tRNA-protein transferase (EC:2.3.2.8)
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:0000256|HAMAP-Rule:MF_00689};; EC=2.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194290};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Putative arginyl-tRNA--protein transferase n=2 Tax=Pseudomonas RepID=I2BXZ2_PSEFL
L1_008_000G1_scaffold_29_74
Pseudomonas amygdali, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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69429..69647
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=289 Tax=Pseudomonadaceae RepID=IF1_PSE14
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=629258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas amygdali.;" source="Pseudomonas amygdali pv. aesculi str. 0893_23.;"
L1_008_000G1_scaffold_29_75
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69893..72163)
DNA (2271bp) protein (757aa)
ATP-dependent Clp protease ATP-binding subunit ClpA n=3 Tax=Pseudomonas RepID=I2BZJ2_PSEFL
clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_76
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72193..72561)
DNA (369bp) protein (123aa)
ATP-dependent Clp protease adapter protein ClpS n=3 Tax=Pseudomonas RepID=I2BUA3_PSEFL
clpS; ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;"
L1_008_000G1_scaffold_29_77
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72787..73047
DNA (261bp) protein (87aa)
Cold shock domain protein CspD n=2 Tax=Pseudomonas RepID=I2BVF5_PSEFL
cspD; cold shock domain-containing protein CspD
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_78
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73123..74379)
DNA (1257bp) protein (419aa)
icd_1; isocitrate dehydrogenase (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446};; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
Isocitrate dehydrogenase [NADP] n=3 Tax=Pseudomonas RepID=I2BQ87_PSEFL
L1_008_000G1_scaffold_29_79
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74863..77088
DNA (2226bp) protein (742aa)
icd_2; isocitrate dehydrogenase (EC:1.1.1.42)
Isocitrate dehydrogenase, NADP-dependent n=2 Tax=Pseudomonas RepID=I2BPG1_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_80
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77293..77739
DNA (447bp) protein (149aa)
Hydrolase, NUDIX family n=3 Tax=Pseudomonas RepID=I2BRP4_PSEFL
NUDIX family hydrolase
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_81
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77850..78923
DNA (1074bp) protein (358aa)
trmU; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=3 Tax=Pseudomonas RepID=I2BK72_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_82
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78920..79543
DNA (624bp) protein (208aa)
High frequency lysogenization protein HflD homolog n=2 Tax=Pseudomonas fluorescens RepID=I2BM84_PSEFL
hypothetical protein
High frequency lysogenization protein HflD homolog {ECO:0000256|HAMAP-Rule:MF_00695}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_29_83
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79669..81039
DNA (1371bp) protein (457aa)
purB; adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Adenylosuccinate lyase n=2 Tax=Pseudomonas RepID=I2BPT0_PSEFL
L1_008_000G1_scaffold_29_84
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81124..82290
DNA (1167bp) protein (389aa)
Cupin 4 family protein n=3 Tax=Pseudomonas RepID=I2BS35_PSEFL
cupin 4 family protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_85
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82283..82705
DNA (423bp) protein (141aa)
Acetyltransferase, GNAT family n=2 Tax=Pseudomonas RepID=I2BPS1_PSEFL
GNAT family acetyltransferase
Uncharacterized protein {ECO:0000313|EMBL:AFJ56254.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_29_86
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82916..83653
DNA (738bp) protein (246aa)
Type II/III secretion system short domain protein n=3 Tax=Pseudomonas RepID=I2BRL7_PSEFL
type II/III secretion system short domain protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_29_87
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84147..85472
DNA (1326bp) protein (442aa)
Isocitrate lyase n=6 Tax=Pseudomonas RepID=E2XU99_PSEFL
isocitrate lyase
Isocitrate lyase {ECO:0000313|EMBL:KGE66385.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;"
L1_008_000G1_scaffold_29_88
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86116..86529
DNA (414bp) protein (138aa)
nuoA; NADH-quinone oxidoreductase, A subunit (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
NADH-quinone oxidoreductase subunit A n=5 Tax=Pseudomonas RepID=I2BYZ9_PSEFL
L1_008_000G1_scaffold_29_89
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86540..87214
DNA (675bp) protein (225aa)
nuoB; NADH-quinone oxidoreductase subunit B (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; TaxID=746360 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens WH6.;"
NADH-quinone oxidoreductase subunit B n=8 Tax=Pseudomonas RepID=E2XUA0_PSEFL
L1_008_000G1_scaffold_29_90
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87286..89070
DNA (1785bp) protein (595aa)
NADH-quinone oxidoreductase subunit C/D {ECO:0000256|HAMAP-Rule:MF_01359, ECO:0000256|SAAS:SAAS00003774}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01359};; NADH dehydrogenase I subunit C/D {ECO:0000256|HAMAP-Rule:MF_01359}; NDH-1 subunit C/D {ECO:0000256|HAMAP-Rule:MF_01359}; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
nuoD; NADH-quinone oxidoreductase, C/D subunit (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C/D n=4 Tax=Pseudomonas RepID=I2BXZ4_PSEFL
Displaying items 61-90 of 208 in total

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