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L1_008_000G1_scaffold_273

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_273_1
Atopobium parvulum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(679..1167)
DNA (489bp) protein (163aa)
Peptidase A24A prepilin type IV n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9F2_ATOPD
peptidase A24A prepilin type IV
Peptidase A24A prepilin type IV {ECO:0000313|EMBL:ACV50740.1}; TaxID=521095 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI; 0546) (Streptococcus parvulus) (Peptostreptococcus parvulus).;"
L1_008_000G1_scaffold_273_2
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1343..1825
DNA (483bp) protein (161aa)
Aminoacyl-tRNA hydrolase {ECO:0000313|EMBL:EWC94593.1}; EC=3.1.1.29 {ECO:0000313|EMBL:EWC94593.1};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9F1_ATOPD
hypothetical protein
L1_008_000G1_scaffold_273_3
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1835..2284)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9F0_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:EWC93745.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L1_008_000G1_scaffold_273_4
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2389..3870
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9E9_ATOPD
PF08903 domain protein {ECO:0000313|EMBL:EWC94568.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L1_008_000G1_scaffold_273_5
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3867..4829
DNA (963bp) protein (321aa)
Glycoside hydrolase family 25 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9E8_ATOPD
Glycoside hydrolase, family 25 {ECO:0000313|EMBL:EWC94575.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
glycoside hydrolase family protein
L1_008_000G1_scaffold_273_6
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4877..5350)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9E7_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:EWC94588.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L1_008_000G1_scaffold_273_7
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5501..6523
DNA (1023bp) protein (341aa)
L-asparaginase, type I {ECO:0000313|EMBL:EWC93743.1}; EC=3.5.1.1 {ECO:0000313|EMBL:EWC93743.1};; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
L-asparaginase, type I n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9E6_ATOPD
type I L-asparaginase
L1_008_000G1_scaffold_273_8
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6527..7432
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9E5_ATOPD
EamA-like transporter family protein {ECO:0000313|EMBL:EWC93750.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L1_008_000G1_scaffold_273_9
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7489..8004)
DNA (516bp) protein (172aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
Ferritin Dps family protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9E4_ATOPD
ferritin Dps family protein
L1_008_000G1_scaffold_273_10
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8175..9854)
DNA (1680bp) protein (560aa)
ABC transporter related n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9E3_ATOPD
ATP-binding cassette protein, ChvD family {ECO:0000313|EMBL:EWC94606.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
putative ABC transporter ATP-binding protein
L1_008_000G1_scaffold_273_11
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10510..12321)
DNA (1812bp) protein (604aa)
Acyltransferase 3 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9E1_ATOPD
Acyltransferase {ECO:0000313|EMBL:EWC94574.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
acyltransferase 3
L1_008_000G1_scaffold_273_12
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12311..13117)
DNA (807bp) protein (269aa)
MORN repeat-containing protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9E0_ATOPD
MORN repeat protein {ECO:0000313|EMBL:EWC93761.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
MORN repeat-containing protein
L1_008_000G1_scaffold_273_13
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13369..15033
DNA (1665bp) protein (555aa)
putative manganese-dependent inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic diphosphatase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9D9_ATOPD
DHHA2 domain protein {ECO:0000313|EMBL:EWC94572.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
L1_008_000G1_scaffold_273_14
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15168..16019)
DNA (852bp) protein (284aa)
Silent information regulator protein Sir2 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9D8_ATOPD
Transcriptional regulator, Sir2 family {ECO:0000313|EMBL:EWC94571.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
silent information regulator protein Sir2
L1_008_000G1_scaffold_273_15
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16102..17247)
DNA (1146bp) protein (382aa)
Cobalamin synthesis protein P47K n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9D7_ATOPD
CobW/P47K family protein {ECO:0000313|EMBL:EWC93747.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
cobalamin synthesis protein P47K
L1_008_000G1_scaffold_273_16
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17372..18619)
DNA (1248bp) protein (416aa)
Amidohydrolase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9D6_ATOPD
Amidohydrolase family protein {ECO:0000313|EMBL:EWC93760.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
amidohydrolase
L1_008_000G1_scaffold_273_17
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18900..19517
DNA (618bp) protein (206aa)
metal dependent phosphohydrolase (EC:3.1.3.5)
Metal dependent phosphohydrolase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9D5_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:EWC93752.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
L1_008_000G1_scaffold_273_18
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19555..20382
DNA (828bp) protein (276aa)
Putative methyltransferase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9D4_ATOPD
Putative tRNA (Guanine-N(7)-)-methyltransferase {ECO:0000313|EMBL:EWC93751.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
putative methyltransferase
L1_008_000G1_scaffold_273_19
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20484..22379)
DNA (1896bp) protein (632aa)
Cadmium-exporting ATPase {ECO:0000313|EMBL:EWC94567.1}; EC=3.6.3.3 {ECO:0000313|EMBL:EWC94567.1};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
Heavy metal translocating P-type ATPase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9D3_ATOPD
heavy metal translocating P-type ATPase
L1_008_000G1_scaffold_273_20
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22567..23970)
DNA (1404bp) protein (468aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9D2_ATOPD
Glycerophosphodiester phosphodiesterase family protein {ECO:0000313|EMBL:EWC94565.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
glycerophosphoryl diester phosphodiesterase
L1_008_000G1_scaffold_273_21
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24116..25849
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9D1_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:EWC94604.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L1_008_000G1_scaffold_273_22
Atopobium parvulum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26004..28157)
DNA (2154bp) protein (718aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9D0_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:ACV50718.1}; Flags: Precursor;; TaxID=521095 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI; 0546) (Streptococcus parvulus) (Peptostreptococcus parvulus).;"
hypothetical protein
L1_008_000G1_scaffold_273_23
Atopobium parvulum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28150..30186)
DNA (2037bp) protein (679aa)
60 kDa inner membrane insertion protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9C9_ATOPD
60 kDa inner membrane insertion protein {ECO:0000313|EMBL:ACV50717.1}; Flags: Precursor;; TaxID=521095 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI; 0546) (Streptococcus parvulus) (Peptostreptococcus parvulus).;"
60 kDa inner membrane insertion protein
L1_008_000G1_scaffold_273_24
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

30645..31454
DNA (810bp) protein (270aa)
Transcriptional regulator, AraC family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9C8_ATOPD
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EWC93758.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
AraC family transcriptional regulator
L1_008_000G1_scaffold_273_25
unknown

Not on your lists

comp(31724..31840)
DNA (117bp) protein (39aa)

This feature has no annotations

L1_008_000G1_scaffold_273_26
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31969..32964)
DNA (996bp) protein (332aa)
2-keto-3-deoxygluconate permease n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9C7_ATOPD
Putative 2-keto-3-deoxygluconate transporter {ECO:0000313|EMBL:EWC93470.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
2-keto-3-deoxygluconate permease
L1_008_000G1_scaffold_273_27
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32974..33729)
DNA (756bp) protein (252aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BSQ8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ41510.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
short-chain dehydrogenase/reductase SDR
L1_008_000G1_scaffold_273_28
unknown

Not on your lists

comp(34080..34409)
DNA (330bp) protein (110aa)

This feature has no annotations

L1_008_000G1_scaffold_273_29
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34354..35007)
DNA (654bp) protein (218aa)
Cobalamin biosynthesis protein CobN n=1 Tax=Rothia mucilaginosa (strain DY-18) RepID=D2NQP2_ROTMD
cobalamin biosynthesis protein CobN
Cobalamin biosynthesis protein CobN {ECO:0000313|EMBL:BAI63968.1}; TaxID=680646 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa (strain DY-18) (Stomatococcus mucilaginosus).;"
L1_008_000G1_scaffold_273_30
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

35219..35971
DNA (753bp) protein (251aa)
ABC transporter related n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9C4_ATOPD
Chelated iron transport system membrane protein YfeB family protein {ECO:0000313|EMBL:EWC96212.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
ABC transporter-like protein
Displaying items 1-30 of 61 in total

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