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L1_008_000G1_scaffold_617

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_617_1
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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2..148
DNA (147bp) protein (49aa)
pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Scardovia inopinata RepID=UPI0001D0A407
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KJY06399.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
Pyridine nucleotide-disulfide oxidoreductase family protein
L1_008_000G1_scaffold_617_2
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

433..831
DNA (399bp) protein (133aa)
Putative transposase n=2 Tax=Lactobacillus fermentum RepID=B2GBJ3_LACF3
transposase
Putative integrase {ECO:0000313|EMBL:AGL88602.1}; TaxID=767453 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum F-6.;"
L1_008_000G1_scaffold_617_3
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1110..1376
DNA (267bp) protein (89aa)
Transposase n=1 Tax=Lactobacillus rhamnosus 2166 RepID=U2H228_LACRH
Uncharacterized protein {ECO:0000313|EMBL:EPC71020.1}; Flags: Fragment;; TaxID=1256208 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp41.;"
hypothetical protein
L1_008_000G1_scaffold_617_4
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1664..1897)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Treponema vincentii F0403 RepID=S3LDB7_9SPIO
PF13711 domain protein {ECO:0000313|EMBL:EWC94365.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L1_008_000G1_scaffold_617_5
unknown

Not on your lists

comp(1940..2254)
DNA (315bp) protein (105aa)

This feature has no annotations

L1_008_000G1_scaffold_617_6
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2302..2904)
DNA (603bp) protein (201aa)
TIGR02185 family protein n=1 Tax=Coriobacteriaceae bacterium BV3Ac1 RepID=U2U396_9ACTN
TIGR02185 family protein {ECO:0000313|EMBL:EWC94073.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
membrane protein
L1_008_000G1_scaffold_617_7
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2975..3685)
DNA (711bp) protein (237aa)
Cobalt transport protein n=1 Tax=Coriobacteriaceae bacterium BV3Ac1 RepID=U2VK46_9ACTN
Cobalt transport protein {ECO:0000313|EMBL:EWC94070.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
membrane protein
L1_008_000G1_scaffold_617_8
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3661..5214)
DNA (1554bp) protein (518aa)
ABC transporter, ATP-binding protein n=1 Tax=Coriobacteriaceae bacterium BV3Ac1 RepID=U2VCG4_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EWC94079.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
ABC transporter
L1_008_000G1_scaffold_617_9
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5211..6929)
DNA (1719bp) protein (573aa)
ABC transporter, ATP-binding protein n=1 Tax=Coriobacteriaceae bacterium BV3Ac1 RepID=U2U4Q1_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EWC94081.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
ABC transporter
L1_008_000G1_scaffold_617_10
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6923..8683)
DNA (1761bp) protein (587aa)
ABC transporter, ATP-binding protein n=1 Tax=Coriobacteriaceae bacterium BV3Ac1 RepID=U2VK59_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EWC94071.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
ABC transporter ATP-binding protein
L1_008_000G1_scaffold_617_11
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8831..9400)
DNA (570bp) protein (190aa)
Transcriptional regulator, TetR family n=1 Tax=Slackia sp. CM382 RepID=J6IBN4_9ACTN
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EWC94076.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
TetR family transcriptional regulator
L1_008_000G1_scaffold_617_12
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9903..10802)
DNA (900bp) protein (300aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W951_ATOPD
Fic/DOC family protein {ECO:0000313|EMBL:EWC94379.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
filamentation induced by cAMP protein fic
L1_008_000G1_scaffold_617_13
Trueperella pyogenes, Trueperella, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10932..11801)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Atopobium sp. oral taxon 810 str. F0209 RepID=U1Y3C8_9ACTN
abortive phage infection protein
Abortive phage infection protein {ECO:0000313|EMBL:AJC69279.1}; TaxID=1435056 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Trueperella.;" source="Trueperella pyogenes TP8.;"
L1_008_000G1_scaffold_617_14
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11798..12379)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Propionimicrobium lymphophilum ACS-093-V-SCH5 RepID=S2WK44_9ACTO
PF13338 domain protein {ECO:0000313|EMBL:EWC94385.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
abortive phage infection protein
L1_008_000G1_scaffold_617_15
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12697..13131)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CN83_9ACTN
PF10387 family protein {ECO:0000313|EMBL:EWC94348.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
Protein of unknown function (DUF2442).
L1_008_000G1_scaffold_617_16
unknown

Not on your lists

comp(13244..13543)
DNA (300bp) protein (100aa)

This feature has no annotations

L1_008_000G1_scaffold_617_17
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13592..14824)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Coriobacteriaceae RepID=UPI000345CB36
AAA domain protein {ECO:0000313|EMBL:EWC93825.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
Predicted ATPase (AAA+ superfamily)
L1_008_000G1_scaffold_617_18
Actinomyces graevenitzii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(14963..15076)
DNA (114bp) protein (38aa)
Putative uncharacterized protein n=1 Tax=Actinomyces graevenitzii C83 RepID=G9PHB0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EHM87259.1}; TaxID=435830 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces graevenitzii C83.;"
L1_008_000G1_scaffold_617_19
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15372..16145
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Actinomyces graevenitzii C83 RepID=G9PHA9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWC94371.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
L1_008_000G1_scaffold_617_20
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16457..17743
DNA (1287bp) protein (429aa)
Transporter, major facilitator family protein n=2 Tax=Actinobacteria RepID=E1L2J3_9ACTN
Transporter, major facilitator family protein {ECO:0000313|EMBL:EWC92007.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
H+ antiporter protein
L1_008_000G1_scaffold_617_21
Actinomyces graevenitzii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18005..19474
DNA (1470bp) protein (490aa)
ABC transporter, ATP-binding protein n=2 Tax=Actinobacteria RepID=E1L2J2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHM87256.1}; TaxID=435830 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces graevenitzii C83.;"
macrolide efflux protein
L1_008_000G1_scaffold_617_22
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19680..21269)
DNA (1590bp) protein (530aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W937_ATOPD
GMP synthase
L1_008_000G1_scaffold_617_23
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21649..23352
DNA (1704bp) protein (568aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W936_ATOPD
LPXTG cell wall anchor domain protein {ECO:0000313|EMBL:EWC94502.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
LPXTG-motif cell wall anchor domain-containing protein
L1_008_000G1_scaffold_617_24
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23816..25618
DNA (1803bp) protein (601aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W936_ATOPD
Cna protein B-type domain protein {ECO:0000313|EMBL:EWC94469.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
LPXTG-motif cell wall anchor domain-containing protein
L1_008_000G1_scaffold_617_25
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25838..27526
DNA (1689bp) protein (563aa)
Cell envelope-related transcriptional attenuator n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W935_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:EWC92009.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
cell envelope-related transcriptional attenuator
L1_008_000G1_scaffold_617_26
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27666..28730)
DNA (1065bp) protein (355aa)
Ribosome-binding ATPase YchF n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W934_ATOPD
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
GTP-binding protein YchF
L1_008_000G1_scaffold_617_27
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28829..30172)
DNA (1344bp) protein (448aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W933_ATOPD
4Fe-4S binding domain protein {ECO:0000313|EMBL:EWC94471.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
4Fe-4S ferredoxin
L1_008_000G1_scaffold_617_28
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30530..32167)
DNA (1638bp) protein (546aa)
60 kDa chaperonin n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W932_ATOPD
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
chaperonin GroEL
L1_008_000G1_scaffold_617_29
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32288..32578)
DNA (291bp) protein (97aa)
10 kDa chaperonin n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W931_ATOPD
chaperonin Cpn10
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
L1_008_000G1_scaffold_617_30
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33388..35379)
DNA (1992bp) protein (664aa)
NAD+ synthetase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W930_ATOPD
Putative NAD+ synthetase {ECO:0000313|EMBL:EWC94426.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
NAD+ synthetase
Displaying items 1-30 of 32 in total

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