ggKbase home page

L1_008_000G1_scaffold_130_15

Organism: dasL1_008_000G1_concoct_76_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(8972..9562)

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7H2_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 196.0
  • Bit_score: 372
  • Evalue 1.80e-100
Ribosomal subunit interface protein {ECO:0000313|EMBL:EWC94113.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 196.0
  • Bit_score: 386
  • Evalue 2.30e-104
sigma 54 modulation protein/30S ribosomal protein S30EA similarity KEGG
DB: KEGG
  • Identity: 95.4
  • Coverage: 196.0
  • Bit_score: 372
  • Evalue 5.20e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Atopobium sp. BS2 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGGTGGACATCAAGATTTCGGGACGCAAGGTAAGCATTTCTGAGGCTTTGCACACACACGTAGATCAGAAAATCGGTGATGCTCTTAAAGTATTTGACATCACTCCTATGTCTTGCGATGTAGTTCTCAGAGTAGACAAAAACCCTTCAAATCCAGATAGAAAGACAGCTGAGGTTACGGTATTTGTTCGTAACAATGTTGTTCGTGTCACTGCTAGCTCTGACGATATGTATGTGGCTATTGATGAAGCAGCAGAAAAAGTCTCCAGACAACTACGCAAGTACAAGACAAAAGTTGTTGAGCGCCGTCATCATGTAAAGTCTGAGCGCGGAGTTGCTCTTACACAAGAAGATCTTGCCAATCTCATTGAGATTCCAGCTGAAGATCTTGATGACCAGCTTGTTCGCGAGAAATACATTGATCTTGAGCCAATGACGGAAGAGGAGGCGCTTGTCCAAACTGACCTTCTCGGCCATGATTTTTATGTCTTTGTTAATTCTTCTACTGGTTTGACTAATGTCATTTACCATCGTAAAAATGGTGGATACGGAATTATCAAACCTAAGATTGAGGAACAGGATGTTCAATAA
PROTEIN sequence
Length: 197
MVDIKISGRKVSISEALHTHVDQKIGDALKVFDITPMSCDVVLRVDKNPSNPDRKTAEVTVFVRNNVVRVTASSDDMYVAIDEAAEKVSRQLRKYKTKVVERRHHVKSERGVALTQEDLANLIEIPAEDLDDQLVREKYIDLEPMTEEEALVQTDLLGHDFYVFVNSSTGLTNVIYHRKNGGYGIIKPKIEEQDVQ*