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L1_008_000G1_scaffold_130

Search features with annotation key words

Displaying items 1-30 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_130_1
unknown

Not on your lists

comp(1..132)
DNA (132bp) protein (44aa)

This feature has no annotations

L1_008_000G1_scaffold_130_2
unknown

Not on your lists

comp(122..286)
DNA (165bp) protein (55aa)

This feature has no annotations

L1_008_000G1_scaffold_130_3
unknown

Not on your lists

comp(300..503)
DNA (204bp) protein (68aa)

This feature has no annotations

L1_008_000G1_scaffold_130_4
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(472..1281)
DNA (810bp) protein (270aa)
Phage antirepressor protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2M4M5_BIFBI
Phage antirepressor protein {ECO:0000313|EMBL:KFI90647.1}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
phage antirepressor protein
L1_008_000G1_scaffold_130_5
unknown

Not on your lists

comp(1337..1600)
DNA (264bp) protein (88aa)

This feature has no annotations

L1_008_000G1_scaffold_130_6
unknown

Not on your lists

comp(1603..1821)
DNA (219bp) protein (73aa)

This feature has no annotations

L1_008_000G1_scaffold_130_7
Halobacillus halophilus, Halobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2076..2360
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI0003449991
SinR/xre family transcription regulator
SinR/xre family transcription regulator {ECO:0000313|EMBL:CCG45468.1}; TaxID=866895 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Halobacillus.;" source="Halobacillus halophilus (strain ATCC 35676 / DSM 2266 / JCM 20832 /; NBRC 102448/ NCIMB 2269) (Sporosarcina halophila).;"
L1_008_000G1_scaffold_130_8
unknown

Not on your lists

2479..2805
DNA (327bp) protein (109aa)

This feature has no annotations

L1_008_000G1_scaffold_130_9
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3103..4293)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7G6_ATOPD
PF04463 family protein {ECO:0000313|EMBL:EWC94105.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L1_008_000G1_scaffold_130_10
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4307..5155)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7G7_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:EWC94988.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L1_008_000G1_scaffold_130_11
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5290..5976)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7G8_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:EWC94103.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L1_008_000G1_scaffold_130_12
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6005..6787)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7G9_ATOPD
NYN domain protein {ECO:0000313|EMBL:EWC94117.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L1_008_000G1_scaffold_130_13
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6814..7878)
DNA (1065bp) protein (355aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7H0_ATOPD
NADP oxidoreductase coenzyme F420-dependent {ECO:0000313|EMBL:EWC95031.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
L1_008_000G1_scaffold_130_14
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7954..8982)
DNA (1029bp) protein (343aa)
DegV family protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7H1_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:EWC94128.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
degV family protein
L1_008_000G1_scaffold_130_15
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8972..9562)
DNA (591bp) protein (197aa)
Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7H2_ATOPD
Ribosomal subunit interface protein {ECO:0000313|EMBL:EWC94113.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
sigma 54 modulation protein/30S ribosomal protein S30EA
L1_008_000G1_scaffold_130_16
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9700..10635)
DNA (936bp) protein (312aa)
Extracellular solute-binding protein family 3 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7H3_ATOPD
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EWC94096.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
family 3 extracellular solute-binding protein
L1_008_000G1_scaffold_130_17
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10951..11700)
DNA (750bp) protein (250aa)
Amidophosphoribosyltransferase-like protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7H4_ATOPD
ComF family protein {ECO:0000313|EMBL:EWC94127.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
amidophosphoribosyltransferase-like protein
L1_008_000G1_scaffold_130_18
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11794..12555)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7H5_ATOPD
ECF-type riboflavin transporter, S component {ECO:0000313|EMBL:EWC94973.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L1_008_000G1_scaffold_130_19
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12649..13110
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7H6_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:EWC95037.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L1_008_000G1_scaffold_130_20
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13115..14599)
DNA (1485bp) protein (495aa)
ABC transporter related n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7H7_ATOPD
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EWC95026.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
ABC transporter-like protein
L1_008_000G1_scaffold_130_21
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14596..15528)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7H8_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:EWC94092.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L1_008_000G1_scaffold_130_22
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15528..16184)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7H9_ATOPD
PF14478 domain protein {ECO:0000313|EMBL:EWC94982.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L1_008_000G1_scaffold_130_23
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16184..19990)
DNA (3807bp) protein (1269aa)
Pyrrolo-quinoline quinone n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7I0_ATOPD
PF14478 domain protein {ECO:0000313|EMBL:EWC95049.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
Pyrrolo-quinoline quinone
L1_008_000G1_scaffold_130_24
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19995..20810)
DNA (816bp) protein (272aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7I1_ATOPD
prolipoprotein diacylglyceryl transferase
L1_008_000G1_scaffold_130_25
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20832..21389)
DNA (558bp) protein (186aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146, ECO:0000256|SAAS:SAAS00054741}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146, ECO:0000256|SAAS:SAAS00054755};; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
Deoxycytidine triphosphate deaminase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7I2_ATOPD
deoxycytidine triphosphate deaminase
L1_008_000G1_scaffold_130_26
Atopobium parvulum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21621..21857)
DNA (237bp) protein (79aa)
Nitrogen-fixing NifU domain protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7I3_ATOPD
nitrogen-fixing NifU domain-containing protein
Nitrogen-fixing NifU domain protein {ECO:0000313|EMBL:ACV51423.1}; TaxID=521095 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI; 0546) (Streptococcus parvulus) (Peptostreptococcus parvulus).;"
L1_008_000G1_scaffold_130_27
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21947..24577)
DNA (2631bp) protein (877aa)
Peptidase, U32 family {ECO:0000313|EMBL:EWC94111.1}; EC=3.4.-.- {ECO:0000313|EMBL:EWC94111.1};; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
Peptidase U32 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7I4_ATOPD
peptidase U32
L1_008_000G1_scaffold_130_28
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24604..25209)
DNA (606bp) protein (202aa)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EWC95002.1}; EC=5.1.3.13 {ECO:0000313|EMBL:EWC95002.1};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7I5_ATOPD
L1_008_000G1_scaffold_130_29
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25326..26006
DNA (681bp) protein (227aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EWC94094.1}; EC=2.4.-.- {ECO:0000313|EMBL:EWC94094.1};; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
Glycosyl transferase family 2 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7I6_ATOPD
glycosyl transferase family protein
L1_008_000G1_scaffold_130_30
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26016..26402
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7I7_ATOPD
PF10066 family protein {ECO:0000313|EMBL:EWC94995.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
Displaying items 1-30 of 113 in total

View Taxonomy