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L1_008_000G1_scaffold_130_28

Organism: dasL1_008_000G1_concoct_76_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(24604..25209)

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EWC95002.1}; EC=5.1.3.13 {ECO:0000313|EMBL:EWC95002.1};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 201.0
  • Bit_score: 412
  • Evalue 2.30e-112
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13) similarity KEGG
DB: KEGG
  • Identity: 97.0
  • Coverage: 201.0
  • Bit_score: 407
  • Evalue 1.50e-111
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7I5_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 201.0
  • Bit_score: 407
  • Evalue 5.30e-111

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Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGGAGTTTCCAAAAGAGCTTAAAAACCCTATTCAATCGGGCAATTTTACGTTTTATGACACCTCGATTGAAGGTGTAAAGGTTGTGGACGTAAAGCTGTACGGTGATGCGCGTGGTGGCTTTATGGAGACCTACCGTGAAGAAAACTTTGTTGCTGGCGGCATTGACGCTTCGTTTGTACAGGACAACCAGTCCTCATCCGTTCAGGGCGTGCTCCGCGGTCTTCACTTCCAGATTGAGCATCCACAGGCAAAGCTTGTGCGCGTAATCTCTGGCACTGTCTTTGACGTTGCCGTTGACCTGCGAGAGGGAAGTCCAACCTGGGGTCAGTGGGAAGGCGTTGTTTTGTCCGCTGAGAACCGCAGGCAGTTCTTTGTTCCTCGCGGATTTGCCCACGGCTTTTTGGTCCTCTCTGAGACTGCGGAGTTCTGCTACAAGTGCGATGACATCTATCATCCAGGTGATGAGGGTGGCATCATGTGGAACGATCCAGAGCTTGGCATTGAGTGGCCAGCATTTCTTGGCGAGAAGACCTTAGATCCAGCAAAGGTTATTCTTTCCGACAAAGATAAGATTCATCCAGCACTTTCTTCACTTAAGAAGTAG
PROTEIN sequence
Length: 202
MEFPKELKNPIQSGNFTFYDTSIEGVKVVDVKLYGDARGGFMETYREENFVAGGIDASFVQDNQSSSVQGVLRGLHFQIEHPQAKLVRVISGTVFDVAVDLREGSPTWGQWEGVVLSAENRRQFFVPRGFAHGFLVLSETAEFCYKCDDIYHPGDEGGIMWNDPELGIEWPAFLGEKTLDPAKVILSDKDKIHPALSSLKK*