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L1_008_000G1_scaffold_81_96

Organism: dasL1_008_000G1_concoct_76_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(93187..96702)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 1171.0
  • Bit_score: 2318
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W808_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 1171.0
  • Bit_score: 2307
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 1171.0
  • Bit_score: 2307
  • Evalue 0.0

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Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3516
GTGTCTACCGCTAAAAAGACTTCCCTCACCACGCCTCAGGCGCATACTGGACGCAGGACGTTCAGTAAGATTCCCGCAGCTATGGAGCTGCCAAATCTGATTTCTGTACAGAAGGAATCATTTGAGCGCTTTATGGGAGAGGGCCTTGCAGAGTCCTTCGCTGAGTTCTCGCCAATTGAGAACAGCGCTGGAACCATGCAGGTCACCTTTGGTGACCATCAGTTCGGCGACCCTGCCAATTCAATGGCTGAGTGTCGTGCAAAAGACATTTCATATCAAGCACCTCTTTTTGTTGACGTCCGTTTTGTCAACAAAGAGACTGGTGAGATGAAGGAGCAGCTTGTCTTCATGGGTGATTTCCCACTGATGACTGAGCGCGGTACCTTCATCATCAACGGTTCTGAGCGCGTTGTGGTTTCACAGCTCGTTCGTTCACCTGGCGTGTATTTCTCGTCAGAGATGGACAACGGTGTTCTGGTCCACAAGTCTCAGTTCATTCCTGCACGTGGTGCATGGCTTGAGTTTGAGGTTGATAAGCGCGGCCACCTGGTCGTCTCCATTGACCGCAAGCGTCGCCAGAGCGCTACCGTCTTCCTCCGTGCACTTGGCATTGCTGTTACCGATGACGAGATTCTCTCGCTCCTTGGTGATTCCGATGTTGTTCGCAACACGCTTGAGCGTGACGTTGCAACCACACGTGAAGATGCTCTTATCGAGATTTATCGTCGTCAGCGTCCAGGCGAGCCACCAACTGTTGACTCCGCCCGTTCTCTTCTTGACGGTCTCTTCTTCAACGAGCAGCGCTATGACCTTGCTCGCGTTGGTCGTTACAAGATCAATAAGAAGCTTGAGGAAGAGATTCCTGCAGATGTTCGTGTCCTTACCAAAGAGGACATTGTCGCAGCTCTTCAGTACCTTCTTGCAGTGCATGCAGGTGATGAGTCTAAGCACCTTGATGACATTGACCACTTTGGCAACCGCCGCGTCCGTACCGTTGGCGAGCTGGTCCAGAACCAGTTCCGCATTGGTATGAGCCGCATGGAGCGCGTTGTTCGTGAGCGTATGGCATCTCAGGACGCAGACGACATCACTCCACAGTCTTTGATCAACATCCGTCCAATTGTTGCTGCAATCAAGGAGTTCTTCGGTTCTTCTCAGCTTTCGCAGTTCATGGACCAGGCAAACCCACTTGCTGGTTTGACCCACAAGCGTCGTCTTTCTGCTCTGGGACCTGGCGGTCTTGCAGGACACAAGTCCGGCTCCAGCCGTCGTACCAACGTTCCTACCGCAGTCCGCGACGTTCACAACTCGCACTACTCCCGTATGTGCCCAATCGAGACTCCTGAGGGACCAAACATTGGTCTTATCGGCTCCTTGGCACTGTACGCTCACGTAAATGAGTACGGCTTTATCGAGGCTCCTTATCGTAAGGTCACAGGCGGTGTTGTCTCTGACGACATTGTCTGGATGACTGCAGACGAGGAGGAGAATCACATTATTGCTCCTGCTAACACCCCAATTGACCCTAAGTCTAAGAAGTTTGTTGAGGTTGACGCAGACGGCAAGATTGTTGATGCAGACCGCGTTATTGCACGTACCCGCGACTTCGACGGTTCCTTCGGTGCGCCTGCACAGGTTCCTGTTGAGGACGTTGACTACATGGACGTTTCTCCACGTCAGCTTCTCTCCGTCGCAGCTAACCTCATTCCATTCCTTGAGCACGACGACGCAAAGCGTACCCTCATGGGCGCAAACATGCAGCGTCAGGCAGTGCCTCTGATTCAGTCCCACGCTCCATTTGTTGGAACTGGCATGGAGGGCCGCGCAGCTCAGGACTCTGGTGAGCTTATTTGCGCAGAGTTTGCCGGCGAGGTCACCGAGGTTGATGCAGCTCACGTTGTCATCTACTCCGATGAGCACGGTTCTCAGCGCTACGATCTTCCTAAGTACGAGCGCTCCAACCAGTCCACTTGCATCAACCATCGTCCAATCGTCACTGTCGGACAGCAGGTTGAGAAAGGCCAGCCAATCGCAGACGGTCCATCTGTTGACCACTCTGAGCTGGCACTTGGTGCAAACCTTACCGTTGCTTACATGCCATGGGAAGGCTACAACTACGAGGACGGTATTATCGTCTCCGAGCGCGTTGTTCAGGAAGACCTTCTGACCTCCGTTAACATTTCCCGCCACGAGATTGATGCTCGTGATACCAAGCTTGGTGCTGAGGAGATTACCCGCGAGATTCCAAACCTTGGTGAGGACATGCTCGCAAACCTCGACGATGACGGTATCATCCGCATCGGCGCTGAGGTTGGCCCTGGCGATATTCTGGTTGGTAAGGTCACTCCTAAGGGTGAGACTGCTCTGACCGCAGAAGAGCGCCTGCTTCGCGCAATCTTCGGTGCTAAGGCACACGATGTTCGTGATACTTCCCTCAAGATGCCACACGGCTCCTATGGCCGCGTTGTTGACGTTGTCCGCTTCAGCCGTGAGGCTGGAGACGACCTGCCTCCAGGAGTAAACGACCTGGTCCGCGTCTTTGTTGCTCAGCGCAGAAAGATCCAGCAGGGCGATAAGATCGCTGGTCGCCACGGTAACAAGGGTGTTATTTGTAAGGTTCTCCCTGTTGAGGACATGCCTTACATGGCAGACGGTACCCCAGTAGACGTTATTCTCGACCCACTGGGCGTTCCTTCCCGTATGAACGTTGGTCAGCTGCTTGAGTGCCACCTTGGTTGGGGCGCTGCACACGGTTGGGATGACGATGACGCAGATTCTAAGCGTTACGTTGAGGGCCCAATTCCTGTTGCAACACCACTCTTTGACGGTGCTACTGATGAGTCCGTTGCAGAGATTGTTCGCCGCACCAACATCAACATGATCAACAAGGCTCTCAAGGAGTACGGCGAGGACATGCGTGAGGAGTTTGTTCCACAGCTCAACGAGCGTGGTAAGACTACCCTCTACGATGGTCGTACTGGCGAGGCATTCAAGAGCCCAATTACCGTTGGTGTTTCTTACATTCTGAAGCTCGGCCACATGGTTGACGATAAGATCCACGCACGTTCAACTGGTCCTTACTCTCTTGTTACCCAGCAGCCTCTGGGTGGTAAGGCACAGTTCGGCGGTCAGCGCTTTGGTGAGATGGAGGTTTGGGCACTGTATGCATACGGTGCTGCTAACGTTCTCCAGGAGATCCTCACCGTTAAGTCTGACGATACCAACGGCCGTGTTAAGACCTACGAGTCCATTGTTAAGGGCGAGAACATTCCTACTGCAGGAATTCCTGAGTCCTTCAAGGTTCTGGTCAAAGAGATTCGCTCCCTGGCACTTGACATTGAGCCAATCTCCTATCGTAAGCGTGCAAATACCGCAAAGGTCACAGATCCTGAGGAGAAGAACGCTGTTGAGATCCTCAACGACCTTGGCTTCACTGAGGTAACCGCTTCCGACCTGTCCCAAGACGCTGAGGGTGCATCCGCACTTGTAGGCGACGCGACCACCGATAAGGAGTAG
PROTEIN sequence
Length: 1172
VSTAKKTSLTTPQAHTGRRTFSKIPAAMELPNLISVQKESFERFMGEGLAESFAEFSPIENSAGTMQVTFGDHQFGDPANSMAECRAKDISYQAPLFVDVRFVNKETGEMKEQLVFMGDFPLMTERGTFIINGSERVVVSQLVRSPGVYFSSEMDNGVLVHKSQFIPARGAWLEFEVDKRGHLVVSIDRKRRQSATVFLRALGIAVTDDEILSLLGDSDVVRNTLERDVATTREDALIEIYRRQRPGEPPTVDSARSLLDGLFFNEQRYDLARVGRYKINKKLEEEIPADVRVLTKEDIVAALQYLLAVHAGDESKHLDDIDHFGNRRVRTVGELVQNQFRIGMSRMERVVRERMASQDADDITPQSLINIRPIVAAIKEFFGSSQLSQFMDQANPLAGLTHKRRLSALGPGGLAGHKSGSSRRTNVPTAVRDVHNSHYSRMCPIETPEGPNIGLIGSLALYAHVNEYGFIEAPYRKVTGGVVSDDIVWMTADEEENHIIAPANTPIDPKSKKFVEVDADGKIVDADRVIARTRDFDGSFGAPAQVPVEDVDYMDVSPRQLLSVAANLIPFLEHDDAKRTLMGANMQRQAVPLIQSHAPFVGTGMEGRAAQDSGELICAEFAGEVTEVDAAHVVIYSDEHGSQRYDLPKYERSNQSTCINHRPIVTVGQQVEKGQPIADGPSVDHSELALGANLTVAYMPWEGYNYEDGIIVSERVVQEDLLTSVNISRHEIDARDTKLGAEEITREIPNLGEDMLANLDDDGIIRIGAEVGPGDILVGKVTPKGETALTAEERLLRAIFGAKAHDVRDTSLKMPHGSYGRVVDVVRFSREAGDDLPPGVNDLVRVFVAQRRKIQQGDKIAGRHGNKGVICKVLPVEDMPYMADGTPVDVILDPLGVPSRMNVGQLLECHLGWGAAHGWDDDDADSKRYVEGPIPVATPLFDGATDESVAEIVRRTNINMINKALKEYGEDMREEFVPQLNERGKTTLYDGRTGEAFKSPITVGVSYILKLGHMVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALYAYGAANVLQEILTVKSDDTNGRVKTYESIVKGENIPTAGIPESFKVLVKEIRSLALDIEPISYRKRANTAKVTDPEEKNAVEILNDLGFTEVTASDLSQDAEGASALVGDATTDKE*