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L1_008_000G1_scaffold_83_92

Organism: dasL1_008_000G1_concoct_76_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 110809..111570

Top 3 Functional Annotations

Value Algorithm Source
RNA pseudouridine synthase {ECO:0000313|EMBL:EWC93854.1}; EC=5.4.99.- {ECO:0000313|EMBL:EWC93854.1};; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 245.0
  • Bit_score: 442
  • Evalue 3.40e-121
Pseudouridine synthase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9Q3_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 245.0
  • Bit_score: 410
  • Evalue 1.00e-111
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 245.0
  • Bit_score: 410
  • Evalue 2.90e-112

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Taxonomy

Atopobium sp. BS2 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 762
ATGTGGTTAAGCGAGGTGAGTAGTGTGGATGAACTTCAAACTGACAATGACCTTGAGATTCTGTACCAAGATGAGTATCTGCTTGCCGTAAATAAACCTGCGGGAATTATTGTTCACGCAGACGGCACCAATGAACCCTCGTTAACCGATGTAGTTTGCGAGAAGCTCCGTGCACTTGAGGGCTCAAGAGAGGTAGATCTTTCCCAGGTCCAAGCTCTGAATCGCCTTGATAAGGAGACTACGGGCATAGTACTCTTTTCGCTCAAAAAAGAAACGCAGCCGCAGTTTGACCAGCTTATTGCCTCCAAGGAGCTTTCCAAAGAGTATCTTGCAGCGGTTAAAGGGGCATTTGAACCAAATAAACTACTGATAGATAAGGCAATTGGAAAAGATCGGCATGACGCTCAGAAGATGAGGGTCTCAGCAACAGGCAAACCTTCTCAAACGGAGGTGCGCCTTATTAAGGTTGCATCGTCTGCGCAAGGTCAAACTCAGAGCTTGTTGCTGGTCAATTTGCTGACAGGAAGAAAGCATCAAATTAGAGTGCACCTCTCGTCACTTGGATTTCCTCTGGTAGGAGATACGTTATACGGAGGAGTGTCTTCTTTGCAGCACGGAGCAAAAAAGAAGCATAAAACACAGCCGCTAATGCTGCATGCATATCGCGTTGAATTTATTCATCCAGTCACGAGCGCAAAAATTGTGATTAAAACGGATATTCCAGAGCGATTTTCTTATTTTGGTGTCACTGAGGTGGACTAA
PROTEIN sequence
Length: 254
MWLSEVSSVDELQTDNDLEILYQDEYLLAVNKPAGIIVHADGTNEPSLTDVVCEKLRALEGSREVDLSQVQALNRLDKETTGIVLFSLKKETQPQFDQLIASKELSKEYLAAVKGAFEPNKLLIDKAIGKDRHDAQKMRVSATGKPSQTEVRLIKVASSAQGQTQSLLLVNLLTGRKHQIRVHLSSLGFPLVGDTLYGGVSSLQHGAKKKHKTQPLMLHAYRVEFIHPVTSAKIVIKTDIPERFSYFGVTEVD*