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L1_008_000G1_scaffold_83

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Displaying items 91-120 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_83_91
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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109890..110831
DNA (942bp) protein (314aa)
Transcriptional regulator, LysR family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9Q2_ATOPD
LysR substrate-binding domain protein {ECO:0000313|EMBL:EWC94163.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
LysR family transcriptional regulator
L1_008_000G1_scaffold_83_92
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

110809..111570
DNA (762bp) protein (254aa)
RNA pseudouridine synthase {ECO:0000313|EMBL:EWC93854.1}; EC=5.4.99.- {ECO:0000313|EMBL:EWC93854.1};; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
Pseudouridine synthase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9Q3_ATOPD
pseudouridine synthase
L1_008_000G1_scaffold_83_93
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

111658..113253
DNA (1596bp) protein (532aa)
[FeFe] hydrogenase, group B1/B3 {ECO:0000313|EMBL:EWC94161.1}; EC=1.12.-.- {ECO:0000313|EMBL:EWC94161.1};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
ferredoxin hydrogenase (EC:1.12.7.2)
Ferredoxin hydrogenase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9Q4_ATOPD
L1_008_000G1_scaffold_83_94
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(113417..113725)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9Q5_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:EWC93955.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L1_008_000G1_scaffold_83_95
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(113888..114616)
DNA (729bp) protein (243aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9Q7_ATOPD
Putative phosphoglycolate phosphatase {ECO:0000313|EMBL:EWC94169.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
HAD-superfamily hydrolase
L1_008_000G1_scaffold_83_96
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


114785..116611
DNA (1827bp) protein (609aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:EWC94019.1}; EC=6.1.1.- {ECO:0000313|EMBL:EWC94019.1};; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
Aspartate--tRNA ligase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9R3_ATOPD
aspartyl-tRNA synthetase
L1_008_000G1_scaffold_83_97
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

116657..118459
DNA (1803bp) protein (601aa)
ABC transporter related n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9R4_ATOPD
ABC transporter transmembrane region {ECO:0000313|EMBL:EWC94168.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
ABC transporter-like protein
L1_008_000G1_scaffold_83_98
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

118452..120272
DNA (1821bp) protein (607aa)
ABC transporter related n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9R5_ATOPD
ABC transporter transmembrane region {ECO:0000313|EMBL:EWC94157.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
ABC transporter-like protein
L1_008_000G1_scaffold_83_99
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

120284..120655
DNA (372bp) protein (124aa)
Putative fluoride ion transporter CrcB n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9R6_ATOPD
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
CrcB protein
L1_008_000G1_scaffold_83_100
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(120751..122175)
DNA (1425bp) protein (475aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9R8_ATOPD
Drug resistance MFS transporter, drug:H+ antiporter-2 family {ECO:0000313|EMBL:EWC93878.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
EmrB/QacA subfamily drug resistance transporter
L1_008_000G1_scaffold_83_101
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

122523..122678
DNA (156bp) protein (52aa)
Uncharacterized protein {ECO:0000313|EMBL:EWC93949.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
L1_008_000G1_scaffold_83_102
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(122766..123527)
DNA (762bp) protein (254aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
gpmA; phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9R9_ATOPD
L1_008_000G1_scaffold_83_103
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

123832..124038
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9S0_ATOPD
Attachment protein, p12 family {ECO:0000313|EMBL:EWC93959.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L1_008_000G1_scaffold_83_104
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

124164..125477
DNA (1314bp) protein (438aa)
Glutamine synthetase catalytic region n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9S1_ATOPD
Glutamine synthetase, beta-grasp domain protein {ECO:0000313|EMBL:EWC93917.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
glutamine synthetase
L1_008_000G1_scaffold_83_105
Atopobium parvulum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

125814..126665
DNA (852bp) protein (284aa)
Extracellular solute-binding protein family 3 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9S2_ATOPD
family 3 extracellular solute-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ACV50860.1}; Flags: Precursor;; TaxID=521095 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI; 0546) (Streptococcus parvulus) (Peptostreptococcus parvulus).;"
L1_008_000G1_scaffold_83_106
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

126766..128196
DNA (1431bp) protein (477aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9S3_ATOPD
PF10989 family protein {ECO:0000313|EMBL:EWC94881.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
polar amino acid ABC transporter inner membrane subunit
L1_008_000G1_scaffold_83_107
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

128196..129056
DNA (861bp) protein (287aa)
ABC transporter related n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9S4_ATOPD
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EWC93898.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
ABC transporter-like protein
L1_008_000G1_scaffold_83_108
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

129211..129885
DNA (675bp) protein (225aa)
Putative two component transcriptional regulator, winged helix family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9S5_ATOPD
Transcriptional regulatory protein, C-terminal domain protein {ECO:0000313|EMBL:EWC93982.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
putative winged helix family two component transcriptional regulator
L1_008_000G1_scaffold_83_109
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

130082..131500
DNA (1419bp) protein (473aa)
Peptidase S1 and S6 chymotrypsin/Hap n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9S6_ATOPD
Trypsin-like peptidase domain protein {ECO:0000313|EMBL:EWC94785.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
peptidase S1 and S6 chymotrypsin/Hap
L1_008_000G1_scaffold_83_110
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

131562..132923
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9S7_ATOPD
RmuC domain protein {ECO:0000313|EMBL:EWC93913.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L1_008_000G1_scaffold_83_111
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

133007..133987
DNA (981bp) protein (327aa)
ABC transporter related n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9S8_ATOPD
Sodium extrusion ABC transporter, ATP-binding protein NatA family protein {ECO:0000313|EMBL:EWC93894.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
ABC transporter-like protein
L1_008_000G1_scaffold_83_112
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

133977..134741
DNA (765bp) protein (255aa)
ABC-2 type transporter n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9S9_ATOPD
Putative lipoprotein {ECO:0000313|EMBL:EWC93966.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
ABC-2 type transporter
L1_008_000G1_scaffold_83_113
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

134744..135529
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9T0_ATOPD
Putative membrane protein {ECO:0000313|EMBL:EWC94007.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L1_008_000G1_scaffold_83_114
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

135732..136055
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9T1_ATOPD
Metal-sensitive transcriptional repressor {ECO:0000313|EMBL:EWC93931.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L1_008_000G1_scaffold_83_115
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

136065..138668
DNA (2604bp) protein (868aa)
Copper-exporting ATPase {ECO:0000313|EMBL:EWC93891.1}; EC=3.6.3.4 {ECO:0000313|EMBL:EWC93891.1};; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
Heavy metal translocating P-type ATPase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9T2_ATOPD
heavy metal translocating P-type ATPase
L1_008_000G1_scaffold_83_116
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(138658..139656)
DNA (999bp) protein (333aa)
Adenosine deaminase {ECO:0000313|EMBL:EWC93935.1}; EC=3.5.4.4 {ECO:0000313|EMBL:EWC93935.1};; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
adenosine deaminase (EC:3.5.4.4)
Adenosine deaminase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9T3_ATOPD
L1_008_000G1_scaffold_83_117
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(139702..140736)
DNA (1035bp) protein (345aa)
ADP-ribosylation/Crystallin J1 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9T4_ATOPD
ADP-ribosylglycohydrolase {ECO:0000313|EMBL:EWC93964.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
ADP-ribosylation/Crystallin J1
L1_008_000G1_scaffold_83_118
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

141141..142133
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9T5_ATOPD
Zinc dependent phospholipase C {ECO:0000313|EMBL:EWC93899.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L1_008_000G1_scaffold_83_119
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

142140..142919
DNA (780bp) protein (260aa)
Metallophosphoesterase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9T6_ATOPD
Calcineurin-like phosphoesterase family protein {ECO:0000313|EMBL:EWC94889.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
metallophosphoesterase
L1_008_000G1_scaffold_83_120
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

142922..143479
DNA (558bp) protein (186aa)
DNA-deoxyinosine glycosylase {ECO:0000313|EMBL:EWC94877.1}; EC=3.2.2.15 {ECO:0000313|EMBL:EWC94877.1};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
Uracil-DNA glycosylase superfamily n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9T7_ATOPD
uracil-DNA glycosylase
Displaying items 91-120 of 125 in total

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