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L1_008_000G1_scaffold_83

Search features with annotation key words

Displaying items 61-90 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_83_61
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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74829..75824
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9M2_ATOPD
EamA-like transporter family protein {ECO:0000313|EMBL:EWC94661.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L1_008_000G1_scaffold_83_62
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(75900..76973)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9M3_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:EWC94648.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L1_008_000G1_scaffold_83_63
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

77267..78199
DNA (933bp) protein (311aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9M4_ATOPD
L1_008_000G1_scaffold_83_64
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

78423..79907
DNA (1485bp) protein (495aa)
G5 domain protein n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MUT2_9FIRM
Repeat, TIGR02543 family {ECO:0000313|EMBL:EWC91743.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
PEP motif putative anchor domain protein
L1_008_000G1_scaffold_83_65
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

80099..82537
DNA (2439bp) protein (813aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
UvrD/REP helicase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9M5_ATOPD
UvrD/REP helicase
L1_008_000G1_scaffold_83_66
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

82540..83322
DNA (783bp) protein (261aa)
MscS Mechanosensitive ion channel n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9M6_ATOPD
Transporter, small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:EWC94657.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
mechanosensitive ion channel MscS
L1_008_000G1_scaffold_83_67
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

83324..84022
DNA (699bp) protein (233aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
Adenosylhomocysteine nucleosidase (EC:3.2.2.9)
Adenosylhomocysteine nucleosidase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9M7_ATOPD
L1_008_000G1_scaffold_83_68
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

84223..85272
DNA (1050bp) protein (350aa)
Phosphate transporter n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9M8_ATOPD
Phosphate transporter family protein {ECO:0000313|EMBL:EWC94659.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
phosphate transporter
L1_008_000G1_scaffold_83_69
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

85331..85951
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9M9_ATOPD
PF01865 family protein {ECO:0000313|EMBL:EWC94670.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L1_008_000G1_scaffold_83_70
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

86075..86770
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9N0_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:EWC94665.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L1_008_000G1_scaffold_83_71
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

86763..87005
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9N1_ATOPD
Membrane protein, PF10031 family {ECO:0000313|EMBL:EWC94655.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L1_008_000G1_scaffold_83_72
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

87019..87507
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9N2_ATOPD
Alkaline shock protein Asp23 family protein {ECO:0000313|EMBL:EWC91752.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L1_008_000G1_scaffold_83_73
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

87598..90069
DNA (2472bp) protein (824aa)
Uncharacterized protein n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S2ZN87_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EWC94677.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
LPXTG-motif cell wall anchor domain-containing protein
L1_008_000G1_scaffold_83_74
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

90295..91059
DNA (765bp) protein (255aa)
Aminoglycoside phosphotransferase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9N3_ATOPD
PTS family porter {ECO:0000313|EMBL:EWC94656.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
aminoglycoside phosphotransferase
L1_008_000G1_scaffold_83_75
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

91160..91798
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S2ZU05_9ACTN
Maltose acetyltransferase {ECO:0000313|EMBL:EWC94668.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L1_008_000G1_scaffold_83_76
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

92091..92864
DNA (774bp) protein (258aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9N4_ATOPD
ABC transporter, permease protein {ECO:0000313|EMBL:EWC94672.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
binding-protein-dependent transport system inner membrane protein
L1_008_000G1_scaffold_83_77
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

92889..93953
DNA (1065bp) protein (355aa)
NMT1/THI5 like domain protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9N5_ATOPD
NMT1/THI5-like protein {ECO:0000313|EMBL:EWC94649.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
NMT1/THI5 like domain-containing protein
L1_008_000G1_scaffold_83_78
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

93937..94842
DNA (906bp) protein (302aa)
ABC transporter related n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9N6_ATOPD
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EWC94645.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
ABC transporter-like protein
L1_008_000G1_scaffold_83_79
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(95476..96897)
DNA (1422bp) protein (474aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
M18 family aminopeptidase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9N7_ATOPD
peptidase M18 aminopeptidase I
L1_008_000G1_scaffold_83_80
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(96980..97921)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9N8_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:EWC94674.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L1_008_000G1_scaffold_83_81
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

98187..99059
DNA (873bp) protein (291aa)
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:EWC93598.1}; EC=4.1.2.13 {ECO:0000313|EMBL:EWC93598.1};; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
fructose-1,6-bisphosphate aldolase (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9N9_ATOPD
L1_008_000G1_scaffold_83_82
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

99625..100635
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CML4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EWC93586.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L1_008_000G1_scaffold_83_83
unknown

Not on your lists

100967..101161
DNA (195bp) protein (65aa)

This feature has no annotations

L1_008_000G1_scaffold_83_84
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(101389..101946)
DNA (558bp) protein (186aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9P1_ATOPD
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:EWC93589.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
NifU family SUF system FeS assembly protein
L1_008_000G1_scaffold_83_85
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(101965..103236)
DNA (1272bp) protein (424aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
Cysteine desulfurase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9P2_ATOPD
SufS subfamily cysteine desulfurase
L1_008_000G1_scaffold_83_86
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(103236..104447)
DNA (1212bp) protein (404aa)
SufBD protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9P3_ATOPD
SufB/sufD domain protein {ECO:0000313|EMBL:EWC93593.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
SufBD protein
L1_008_000G1_scaffold_83_87
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(104447..105865)
DNA (1419bp) protein (473aa)
FeS assembly protein SufB n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9P4_ATOPD
FeS assembly protein SufB {ECO:0000313|EMBL:EWC93592.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
FeS assembly protein SufB
L1_008_000G1_scaffold_83_88
Atopobium parvulum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(105865..106632)
DNA (768bp) protein (256aa)
FeS assembly ATPase SufC n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9P5_ATOPD
FeS assembly ATPase SufC
FeS assembly ATPase SufC {ECO:0000313|EMBL:ACV50833.1}; TaxID=521095 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI; 0546) (Streptococcus parvulus) (Peptostreptococcus parvulus).;"
L1_008_000G1_scaffold_83_89
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


106967..108277
DNA (1311bp) protein (437aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9P6_ATOPD
L1_008_000G1_scaffold_83_90
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(108340..109773)
DNA (1434bp) protein (478aa)
Na+/H+ antiporter NhaC n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9Q1_ATOPD
Na+/H+ antiporter family protein {ECO:0000313|EMBL:EWC94156.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
Na+/H+ antiporter NhaC
Displaying items 61-90 of 125 in total

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