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L1_008_000G1_scaffold_990_23

Organism: dasL1_008_000G1_concoct_76_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 20709..21848

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W889_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 385.0
  • Bit_score: 428
  • Evalue 4.20e-117
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EWC94083.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 379.0
  • Bit_score: 723
  • Evalue 1.20e-205
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 385.0
  • Bit_score: 428
  • Evalue 1.20e-117

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Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1140
GTGTTACTGAGCGAGAAAATCATGAGCCTCAGAAAGCGTAATGGTTGGTCACAAGAAGAGCTTGCACAACAGCTTGGCGTTTCGAGGCAGTCAGTTTCTAAATGGGAGTCTATGGCTTCCATGCCTGATATTCAAAAGATTATGGCTATGAGCGAGCTCTTTGGCGTTTCCACAGACTACCTGCTCAAAGACGAGCTTGAAGAGCTTCCAGCCACTGCCATCGCTGTTGATTATGCGGCCTCTTCGGGGCAGGTTGACTCTTCGGATCCCGCTGCCGCAAGCACCGTAGGCAGCACCACGGACAGCACTGACGGCGGCACCGTTGGCGAATCTTCCACTGACAACGCATCTACCAGCAAAACTGTGGCACCGAAGCTCAGCGTTTCTCTCGACACAGCCACCGAATACCTGGATGCAATCGCACGAACTTCTCGACCCACGGCAGGTGCAATTACCCTCTTTATCCTGGGGCCCGCGCTTCTTGTCTCGCTTGCAACATACAGCGAAGACGCGCTTTACTTTGATCCGATGCACATTTCTCCAGATGCGATGGGTATCGCAGGCATTTGCATCATGATGCTCTTCATTGCTGCGGGCGTTGGCCTGCTGATTCTCCAGGACATGAAGCTCGCGAAGTTTAAGCAGCTCAAGGAGGCCTCTCTCGAGCTCCAGTATGGTGTCGAGGCTGCCGTTCGTAGGCGCGCCGAGTCCACAGAATCGTTGCGATACGTGCAACAGGCTGCCGGCGTCTGCCTTACCATCCTGAGCGCAATCCCCTTCCTTATTGCCTCGTACTATGGGACTGGCCTCACCTTTGCTCTTGGTTTCTTCGTGGCAGCAATTCTCGTCTCTCTTGGCGTTTACCTGCTGGTTTACTCGGGAATTCTTAGAGATGGCTACAGGGTTCTTCTTCAGGAAGGCGATTTCTCTCACGACGAGAAAAGCAACAAGAGAGACTCCAAATCCGCAGCATTGAAGTACAGGCCAATTGCCAGGGCGTATTTTGGCACCATTACCTTGCTGTACGTGGGCTATAGCTTCATCACCAAGGACTGGAAAAGTTCCTGGATTATCTGGCCTGTTTCCGCGCTCCTCTACCACATCATCATCAGCATCCTGAACGCTCTGAAGAAAAAGTAA
PROTEIN sequence
Length: 380
VLLSEKIMSLRKRNGWSQEELAQQLGVSRQSVSKWESMASMPDIQKIMAMSELFGVSTDYLLKDELEELPATAIAVDYAASSGQVDSSDPAAASTVGSTTDSTDGGTVGESSTDNASTSKTVAPKLSVSLDTATEYLDAIARTSRPTAGAITLFILGPALLVSLATYSEDALYFDPMHISPDAMGIAGICIMMLFIAAGVGLLILQDMKLAKFKQLKEASLELQYGVEAAVRRRAESTESLRYVQQAAGVCLTILSAIPFLIASYYGTGLTFALGFFVAAILVSLGVYLLVYSGILRDGYRVLLQEGDFSHDEKSNKRDSKSAALKYRPIARAYFGTITLLYVGYSFITKDWKSSWIIWPVSALLYHIIISILNALKKK*