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L1_008_000G1_scaffold_990

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_990_1
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(416..778)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W876_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:EWC94394.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L1_008_000G1_scaffold_990_2
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(778..1356)
DNA (579bp) protein (193aa)
Isochorismatase family protein {ECO:0000313|EMBL:EWC94396.1}; EC=3.-.-.- {ECO:0000313|EMBL:EWC94396.1};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
Isochorismatase hydrolase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W877_ATOPD
isochorismatase hydrolase
L1_008_000G1_scaffold_990_3
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1501..2451)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CN27_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EWC92968.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
L1_008_000G1_scaffold_990_4
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2557..3504)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S3AM90_9ACTN
Putative lipoprotein {ECO:0000313|EMBL:EWC92969.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
L1_008_000G1_scaffold_990_5
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3558..4493)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CN79_9ACTN
Putative lipoprotein {ECO:0000313|EMBL:EWC92972.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
L1_008_000G1_scaffold_990_6
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4541..5488)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S3AM90_9ACTN
Putative lipoprotein {ECO:0000313|EMBL:EWC92960.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
L1_008_000G1_scaffold_990_7
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5625..6224
DNA (600bp) protein (200aa)
Uncharacterized protein {ECO:0000313|EMBL:EWC95894.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
L1_008_000G1_scaffold_990_8
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6334..7224)
DNA (891bp) protein (297aa)
Paternally-expressed protein 3 protein n=1 Tax=Fusarium oxysporum f. sp. cubense (strain race 4) RepID=N1SB30_FUSC4
Uncharacterized protein {ECO:0000313|EMBL:EWC94177.1}; Flags: Fragment;; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
SzPSe-like cell surface-anchored protein
L1_008_000G1_scaffold_990_9
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7258..8055)
DNA (798bp) protein (266aa)
Cell surface protein n=1 Tax=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) RepID=B4U1L8_STREM
Uncharacterized protein {ECO:0000313|EMBL:EWC94170.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
cell surface protein
L1_008_000G1_scaffold_990_10
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8228..8815)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W878_ATOPD
tRNA threonylcarbamoyl adenosine modification protein YjeE {ECO:0000313|EMBL:EWC92965.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L1_008_000G1_scaffold_990_11
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8808..9383)
DNA (576bp) protein (192aa)
Uracil-DNA glycosylase, family 4 {ECO:0000313|EMBL:EWC94172.1}; EC=3.2.2.- {ECO:0000313|EMBL:EWC94172.1};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
Phage SPO1 DNA polymerase-related protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W879_ATOPD
phage SPO1 DNA polymerase-like protein
L1_008_000G1_scaffold_990_12
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9383..10537)
DNA (1155bp) protein (385aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W880_ATOPD
L1_008_000G1_scaffold_990_13
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10547..12172)
DNA (1626bp) protein (542aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W881_ATOPD
YjeF family protein {ECO:0000313|EMBL:EWC94179.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
carbohydrate kinase
L1_008_000G1_scaffold_990_14
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12176..12706)
DNA (531bp) protein (177aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071085}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071082};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
Holo-[acyl-carrier-protein] synthase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W882_ATOPD
holo-acyl-carrier-protein synthase
L1_008_000G1_scaffold_990_15
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12731..14074)
DNA (1344bp) protein (448aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
Phosphoglucosamine mutase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W883_ATOPD
phosphoglucosamine mutase
L1_008_000G1_scaffold_990_16
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(14303..14698)
DNA (396bp) protein (132aa)
30S ribosomal protein S9 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W884_ATOPD
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
30S ribosomal protein S9
L1_008_000G1_scaffold_990_17
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(14702..15142)
DNA (441bp) protein (147aa)
50S ribosomal protein L13 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W885_ATOPD
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
50S ribosomal protein L13
L1_008_000G1_scaffold_990_18
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15475..16524
DNA (1050bp) protein (350aa)
Putative esterase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W886_ATOPD
Putative esterase {ECO:0000313|EMBL:EWC94171.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
putative esterase
L1_008_000G1_scaffold_990_19
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16774..17712
DNA (939bp) protein (313aa)
1-phosphofructokinase {ECO:0000313|EMBL:EWC92964.1}; EC=2.7.1.56 {ECO:0000313|EMBL:EWC92964.1};; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
1-phosphofructokinase (EC:2.7.1.56)
1-phosphofructokinase n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CLC0_9ACTN
L1_008_000G1_scaffold_990_20
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18147..18521)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CLC1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EWC92973.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L1_008_000G1_scaffold_990_21
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18618..19574)
DNA (957bp) protein (319aa)
Patatin n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W888_ATOPD
Phospholipase, patatin family {ECO:0000313|EMBL:EWC92978.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
patatin
L1_008_000G1_scaffold_990_22
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19745..20359)
DNA (615bp) protein (205aa)
penicillin-binding protein (EC:2.4.1.129)
Peptidase domain protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XNZ6_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:EWC92975.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
L1_008_000G1_scaffold_990_23
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20709..21848
DNA (1140bp) protein (380aa)
Transcriptional regulator, XRE family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W889_ATOPD
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EWC94083.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
XRE family transcriptional regulator
L1_008_000G1_scaffold_990_24
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22276..22791)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S2ZJU3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EWC92402.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L1_008_000G1_scaffold_990_25
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22891..23337)
DNA (447bp) protein (149aa)
Response regulator receiver protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W895_ATOPD
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EWC92406.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
response regulator receiver protein
L1_008_000G1_scaffold_990_26
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23672..25738)
DNA (2067bp) protein (689aa)
Conserved repeat domain protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W899_ATOPD
Repeat protein {ECO:0000313|EMBL:EWC94065.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L1_008_000G1_scaffold_990_27
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25994..26332)
DNA (339bp) protein (113aa)
Gram-positive signal peptide protein, YSIRK family n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CND0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EWC92404.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
Displaying 27 items

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