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L1_008_000G1_scaffold_2004

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_2004_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1291
DNA (1290bp) protein (430aa)
Putative phage integrase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UNT7_PSEUP
Recombinase {ECO:0000313|EMBL:KDE88984.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
putative phage integrase
L1_008_000G1_scaffold_2004_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1316..4309
DNA (2994bp) protein (998aa)
transposase Tn5044 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031B1923
Transposase {ECO:0000313|EMBL:KDE88983.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
putative transposon Tn5044/Tn3926 transposase
L1_008_000G1_scaffold_2004_3
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4410..4703)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Aeromonas hydrophila SSU RepID=K1JL39_AERHY
Uncharacterized protein {ECO:0000313|EMBL:EKB27258.1}; TaxID=1073377 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila SSU.;"
transcriptional regulator
L1_008_000G1_scaffold_2004_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5002..5352
DNA (351bp) protein (117aa)
PF11171 family protein n=2 Tax=Burkholderia multivorans RepID=J5BKA4_9BURK
Lipoprotein {ECO:0000313|EMBL:KKD57577.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
putative lipoprotein
L1_008_000G1_scaffold_2004_5
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5691..6488
DNA (798bp) protein (266aa)
Uncharacterized protein n=2 Tax=Proteobacteria RepID=U2H2M2_BURVI
PF10074 family protein {ECO:0000313|EMBL:KCB37316.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
hypothetical protein
L1_008_000G1_scaffold_2004_6
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6564..6848
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Proteobacteria RepID=Q0BE83_BURCM
transcriptional regulator
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:KCB37030.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
L1_008_000G1_scaffold_2004_7
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6875..7732
DNA (858bp) protein (286aa)
Replication initiator protein A n=2 Tax=Burkholderia multivorans RepID=J5BKE4_9BURK
RepA replication protein
RepA replication protein {ECO:0000313|EMBL:AKA21928.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis.;"
L1_008_000G1_scaffold_2004_8
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7998..8636
DNA (639bp) protein (213aa)
Plasmid partitioning protein n=1 Tax=Pseudomonas aeruginosa BWHPSA026 RepID=U8NA87_PSEAI
ATPase {ECO:0000313|EMBL:AKC78194.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
ParA type ATPase
L1_008_000G1_scaffold_2004_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8633..8896
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KK79_STEMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH11468.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
L1_008_000G1_scaffold_2004_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8893..9441
DNA (549bp) protein (183aa)
Glycosidases n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KK80_STEMA
glycosidases
Glycosidases {ECO:0000313|EMBL:CCH11469.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
L1_008_000G1_scaffold_2004_11
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9438..10037
DNA (600bp) protein (200aa)
Conjugative transfer signal peptidase TraF n=1 Tax=Aeromonas hydrophila SSU RepID=K1J6X1_AERHY
Conjugative transfer signal peptidase TraF {ECO:0000313|EMBL:EKB27250.1}; TaxID=1073377 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila SSU.;"
type IV secretion system protein
L1_008_000G1_scaffold_2004_12
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10486..12474
DNA (1989bp) protein (663aa)
Putative type iv secretory pathway vird2 (Relaxase)-related protein n=1 Tax=Ralstonia solanacearum (strain GMI1000) RepID=Q8XW74_RALSO
Type VI secretion protein {ECO:0000313|EMBL:KIZ32540.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
hypothetical protein
L1_008_000G1_scaffold_2004_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12521..12691)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Y519_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:KDE91892.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
transcriptional regulator
Displaying 13 items

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