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L1_008_000G1_scaffold_39

Search features with annotation key words

Displaying items 1-30 of 206 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_39_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1291
DNA (1290bp) protein (430aa)
Site-specific recombinase, phage integrase family n=3 Tax=Stenotrophomonas maltophilia RepID=M3G7V7_STEMA
phage integrase
Integrase {ECO:0000313|EMBL:EQM88132.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
L1_008_000G1_scaffold_39_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1316..4309
DNA (2994bp) protein (998aa)
Putative transposase for transposon Tn5044/Tn3926 n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FS47_STRMK
tnpA; transposon Tn5044/Tn3926 transposase
Putative transposase for transposon Tn5044/Tn3926 {ECO:0000313|EMBL:CAQ45950.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
L1_008_000G1_scaffold_39_3
unknown

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comp(4353..4631)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036B101A
L1_008_000G1_scaffold_39_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4726..4971
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036A7745
Uncharacterized protein {ECO:0000313|EMBL:EQM88086.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
DNA-binding protein
L1_008_000G1_scaffold_39_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5940..6848)
DNA (909bp) protein (303aa)
Uncharacterized transporter n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D4P8_STEMA
Uncharacterized transporter {ECO:0000313|EMBL:CCP18511.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
hypothetical protein
L1_008_000G1_scaffold_39_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6946..7749
DNA (804bp) protein (268aa)
AraC family transcriptional regulator n=1 Tax=Pseudomonas geniculata RepID=UPI00029B3485
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEM52915.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
L1_008_000G1_scaffold_39_7
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7709..8617)
DNA (909bp) protein (303aa)
LysR family transcriptional regulator n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FAW2_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:EHK64630.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
LysR family transcriptional regulator protein
L1_008_000G1_scaffold_39_8
Pseudomonas sp. FeS53a, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8711..9220
DNA (510bp) protein (170aa)
Lactoylglutathione lyase family protein n=1 Tax=Gallaecimonas xiamenensis 3-C-1 RepID=K2JIA4_9GAMM
Glyoxalase family protein {ECO:0000313|EMBL:KIV68354.1}; TaxID=1604022 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FeS53a.;"
lactoylglutathione lyase family protein
L1_008_000G1_scaffold_39_9
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9398..9925
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FAW1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EHK64629.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
polyketide cyclase
L1_008_000G1_scaffold_39_10
Xanthomonas gardneri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9978..11096
DNA (1119bp) protein (373aa)
NADH:flavin oxidoreductase n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0CB39_9XANT
NADH:flavin oxidoreductase {ECO:0000313|EMBL:EGD17242.1}; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas gardneri ATCC 19865.;"
NADH:flavin oxidoreductase
L1_008_000G1_scaffold_39_11
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11312..11665)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TQ72_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ59022.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_008_000G1_scaffold_39_12
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12384..12656
DNA (273bp) protein (91aa)
HTH-type transcriptional regulator betI n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SX65_XANCT
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:GAJ96269.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
transcriptional regulator TetR family
L1_008_000G1_scaffold_39_13
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13246..14274)
DNA (1029bp) protein (343aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXL9_VARPS
hypothetical protein
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
L1_008_000G1_scaffold_39_14
unknown

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comp(14509..15114)
DNA (606bp) protein (202aa)

This feature has no annotations

L1_008_000G1_scaffold_39_15
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15263..16237)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L7W8_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EQM88107.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
cointegrate resolution protein
L1_008_000G1_scaffold_39_16
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16342..17418
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KWT3_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EQM88108.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
integrase
L1_008_000G1_scaffold_39_17
Alcanivorax hongdengensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17520..19484
DNA (1965bp) protein (655aa)
Uncharacterized protein n=1 Tax=Alcanivorax hongdengensis A-11-3 RepID=L0WEU1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EKF74677.1}; TaxID=1177179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax hongdengensis A-11-3.;"
hypothetical protein
L1_008_000G1_scaffold_39_18
unknown

Not on your lists

comp(19382..19579)
DNA (198bp) protein (66aa)

This feature has no annotations

L1_008_000G1_scaffold_39_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19653..20354)
DNA (702bp) protein (234aa)
Family 3 adenylate cyclase n=1 Tax=Rhodanobacter denitrificans RepID=M4NT80_9GAMM
family 3 adenylate cyclase
Family 3 adenylate cyclase {ECO:0000313|EMBL:AGG90696.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
L1_008_000G1_scaffold_39_20
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20357..21277)
DNA (921bp) protein (307aa)
Cyclic nucleotide-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NKT6_9GAMM
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:KGK64509.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. phaseoli.;"
cyclic nucleotide-binding protein
L1_008_000G1_scaffold_39_21
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21411..22943
DNA (1533bp) protein (511aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000369DB4A
Transcriptional regulator {ECO:0000313|EMBL:KGK64510.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. phaseoli.;"
transcriptional regulator
L1_008_000G1_scaffold_39_22
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22940..23818
DNA (879bp) protein (293aa)
UPI0003CFE975 related cluster n=1 Tax=unknown RepID=UPI0003CFE975
Uncharacterized protein {ECO:0000313|EMBL:KGK64511.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. phaseoli.;"
hypothetical protein
L1_008_000G1_scaffold_39_23
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23763..24287
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. BT03 RepID=J3BRR1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGK64512.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. phaseoli.;"
L1_008_000G1_scaffold_39_24
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25132..26043)
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=2 Tax=Xanthomonas fuscans subsp. aurantifolii RepID=D4SX57_9XANT
Uncharacterized protein {ECO:0000313|EMBL:EFF47230.1}; TaxID=427082 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535.;"
hypothetical protein
L1_008_000G1_scaffold_39_25

Not on your lists

26164..26487
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=mine drainage metagenome RepID=T1BBP4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD67292.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
L1_008_000G1_scaffold_39_26
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26863..27579
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Xanthomonas oryzae pv. oryzae (strain PXO99A) RepID=B2SKL7_XANOP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGO99722.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
L1_008_000G1_scaffold_39_27
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27572..29422
DNA (1851bp) protein (617aa)
Uncharacterized protein n=1 Tax=Xanthomonas oryzae pv. oryzae (strain PXO99A) RepID=B2SKL8_XANOP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGO99721.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
L1_008_000G1_scaffold_39_28
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29445..30491
DNA (1047bp) protein (349aa)
Type II secretory pathway, component ExeA n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3FG17_STEMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGO99720.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
L1_008_000G1_scaffold_39_29
unknown

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30484..31863
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3G7T8_STEMA
hypothetical protein
L1_008_000G1_scaffold_39_30
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32807..33982
DNA (1176bp) protein (392aa)
Integrase family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUK3_9GAMM
Integrase {ECO:0000313|EMBL:KGM51644.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
integrase
Displaying items 1-30 of 206 in total

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