ggKbase home page

L1_008_000G1_scaffold_45

Search features with annotation key words

Displaying items 1-30 of 185 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_45_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(189..2030)
DNA (1842bp) protein (614aa)
Putative transmembrane protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FR82_STRMK
transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:CAQ44584.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
L1_008_000G1_scaffold_45_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2073..3026
DNA (954bp) protein (318aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=J7VM34_STEMA
ATPase
Uncharacterized protein {ECO:0000313|EMBL:EJP77458.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
L1_008_000G1_scaffold_45_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3029..3973
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7SX75_STEMA
transmembrane protein
Uncharacterized protein {ECO:0000313|EMBL:EJP77457.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
L1_008_000G1_scaffold_45_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3966..5915
DNA (1950bp) protein (650aa)
Putative cysteine protease n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3DQE4_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP77456.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
transmembrane transglutaminase
L1_008_000G1_scaffold_45_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5912..6439
DNA (528bp) protein (176aa)
Slp family outer membrane lipoprotein n=3 Tax=Stenotrophomonas maltophilia RepID=J7UND1_STEMA
outer membrane lipoprotein
Putative outer membrane lipoprotein {ECO:0000313|EMBL:CAQ44580.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
L1_008_000G1_scaffold_45_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6517..6876)
DNA (360bp) protein (120aa)
Uncharacterized protein n=4 Tax=Stenotrophomonas maltophilia RepID=B2FR77_STRMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJP77454.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
L1_008_000G1_scaffold_45_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6944..7465)
DNA (522bp) protein (174aa)
Recombination protein RecR n=3 Tax=Stenotrophomonas maltophilia RepID=B2FR76_STRMK
recR; recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
L1_008_000G1_scaffold_45_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7656..7976)
DNA (321bp) protein (107aa)
Nucleoid-associated protein Smlt1015 n=4 Tax=Stenotrophomonas maltophilia RepID=Y1015_STRMK
hypothetical protein
Nucleoid-associated protein DF40_012355 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
L1_008_000G1_scaffold_45_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7983..10034)
DNA (2052bp) protein (684aa)
dnaX; DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunits gamma and tau n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3DQE0_STEMA
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EJP77451.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
L1_008_000G1_scaffold_45_10
unknown

Not on your lists

comp(12649..13473)
DNA (825bp) protein (275aa)

This feature has no annotations

L1_008_000G1_scaffold_45_11
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13466..14707)
DNA (1242bp) protein (414aa)
Phage integrase n=1 Tax=Thauera phenylacetica B4P RepID=N6ZVL9_9RHOO
Phage integrase {ECO:0000313|EMBL:ENO98368.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
intZ_[H]; Integrase
L1_008_000G1_scaffold_45_12
Xanthomonas alfalfae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15073..16371
DNA (1299bp) protein (433aa)
Integrase n=1 Tax=Xanthomonas axonopodis pv. citrumelo F1 RepID=G2M0W6_9XANT
integrase
Integrase {ECO:0000313|EMBL:AEO41907.1}; TaxID=981368 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. citrumelo F1.;"
L1_008_000G1_scaffold_45_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16513..16809
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VFK5_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP77054.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
L1_008_000G1_scaffold_45_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16867..18438)
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VKY4_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP77053.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
MobA/MobL family protein
L1_008_000G1_scaffold_45_15
Acinetobacter schindleri, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18853..19329
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Acinetobacter schindleri CIP 107287 RepID=N9AD35_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENV44004.1}; TaxID=1217988 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter schindleri CIP 107287.;"
L1_008_000G1_scaffold_45_16
Acinetobacter venetianus, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19319..20074
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Acinetobacter venetianus RAG-1 = CIP 110063 RepID=N9A116_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENV37743.1}; TaxID=1191460 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. (strain ATCC 31012).;"
hypothetical protein
L1_008_000G1_scaffold_45_17
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20161..20313)
DNA (153bp) protein (51aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI000316E1BA
isxal7 transposase orfa protein
Isxal7 transposase orfa protein {ECO:0000313|EMBL:AJD48287.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax pacificus W11-5.;"
L1_008_000G1_scaffold_45_18
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20488..20706)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7V397_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP77051.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
L1_008_000G1_scaffold_45_19
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20745..21044)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7UM72_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP77050.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
L1_008_000G1_scaffold_45_20
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21058..21327)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VFK2_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP77049.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
L1_008_000G1_scaffold_45_21
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22183..22431
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IKU0_BEII9
Uncharacterized protein {ECO:0000313|EMBL:EZQ12959.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
L1_008_000G1_scaffold_45_22
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22796..23185)
DNA (390bp) protein (130aa)
virulence regulator n=1 Tax=Xanthomonas campestris RepID=UPI0001CC0477
Virulence regulator {ECO:0000313|EMBL:CDN18865.1}; TaxID=487899 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. viticola.;"
hns; DNA-binding protein H-NS
L1_008_000G1_scaffold_45_23
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23701..25098
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7UM63_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP77040.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
Integrase
L1_008_000G1_scaffold_45_24
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

25163..26080
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDA8_RHOM4
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
L1_008_000G1_scaffold_45_25
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26161..26931
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Xanthomonas campestris pv. vesicatoria (strain 85-10) RepID=Q3BUY2_XANC5
Uncharacterized protein {ECO:0000313|EMBL:CDN20723.1}; TaxID=487899 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. viticola.;"
hypothetical protein
L1_008_000G1_scaffold_45_26
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27141..27941)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7SWR9_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP77037.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
L1_008_000G1_scaffold_45_27
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27951..28784)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7V383_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP77036.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
hypothetical protein
L1_008_000G1_scaffold_45_28
unknown

Not on your lists

comp(28797..29102)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000361B047
L1_008_000G1_scaffold_45_29
unknown

Not on your lists

comp(29121..29735)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003747894
hypothetical protein
L1_008_000G1_scaffold_45_30
Pseudomonas sp. GM55, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29800..30213)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036B913A
Uncharacterized protein {ECO:0000313|EMBL:EJM69954.1}; TaxID=1144333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM55.;"
hypothetical protein
Displaying items 1-30 of 185 in total

View Taxonomy