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L1_008_000G1_scaffold_845

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_845_1
unknown

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2..70
DNA (69bp) protein (23aa)

This feature has no annotations

L1_008_000G1_scaffold_845_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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338..625
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. VLB120 RepID=U5VE95_9PSED
Uncharacterized protein {ECO:0000313|EMBL:KDE91896.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
hypothetical protein
L1_008_000G1_scaffold_845_3
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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789..1733
DNA (945bp) protein (315aa)
D-alanyl-D-alanine endopeptidase n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002D65436
D-alanyl-D-alanine endopeptidase {ECO:0000313|EMBL:KEX94177.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (Arthrobacter siderocapsulatus).;"
LysR family regulatory protein
L1_008_000G1_scaffold_845_4
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1730..1993
DNA (264bp) protein (88aa)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=U8BJH6_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKA21945.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis.;"
L1_008_000G1_scaffold_845_5
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2229..4229
DNA (2001bp) protein (667aa)
Conjugal transfer protein TraG n=1 Tax=Xanthomonas citri pv. mangiferaeindicae LMG 941 RepID=H8FI66_XANCI
Conjugal transfer protein TraG {ECO:0000313|EMBL:AKA21946.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis.;"
conjugal transfer protein TraG
L1_008_000G1_scaffold_845_6
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4226..4690
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL08 RepID=U8KRP4_PSEAI
CopG family transcriptional regulator {ECO:0000313|EMBL:KEX93337.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (Arthrobacter siderocapsulatus).;"
CopG family transcriptional regulator
L1_008_000G1_scaffold_845_7
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4687..5733
DNA (1047bp) protein (349aa)
P-type conjugative transfer ATPase TrbB n=3 Tax=Pseudomonas aeruginosa RepID=U8BLA8_PSEAI
P-type conjugative transfer ATPase TrbB
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:AKA21948.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis.;"
L1_008_000G1_scaffold_845_8
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5730..6113
DNA (384bp) protein (128aa)
TrbC-like protein n=3 Tax=Pseudomonas aeruginosa RepID=U8BLK7_PSEAI
trbC-like protein
TrbC-like protein {ECO:0000313|EMBL:AKA21949.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis.;"
L1_008_000G1_scaffold_845_9
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6110..6379
DNA (270bp) protein (90aa)
Conjugal transfer TrbD transmembrane protein n=1 Tax=Xanthomonas citri pv. mangiferaeindicae LMG 941 RepID=H8FI62_XANCI
Conjugal transfer protein TrbD {ECO:0000313|EMBL:KEX93334.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (Arthrobacter siderocapsulatus).;"
conjugal transfer protein TrbD
L1_008_000G1_scaffold_845_10
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6392..8842
DNA (2451bp) protein (817aa)
Conjugal transfer ATPase TrbE n=2 Tax=Pseudomonas aeruginosa RepID=U8EI67_PSEAI
Conjugal transfer ATPase TrbE {ECO:0000313|EMBL:AKA21951.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis.;"
conjugal transfer ATPase TrbE
L1_008_000G1_scaffold_845_11
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8839..9582
DNA (744bp) protein (248aa)
P-type conjugative transfer protein TrbJ n=1 Tax=Xanthomonas citri pv. mangiferaeindicae LMG 941 RepID=H8FI60_XANCI
conjugal transfer protein TrbJ
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:AKA21952.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis.;"
L1_008_000G1_scaffold_845_12
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9595..9927
DNA (333bp) protein (111aa)
Lipoprotein n=1 Tax=Xanthomonas citri pv. mangiferaeindicae LMG 941 RepID=H8FI59_XANCI
Putative lipoprotein {ECO:0000313|EMBL:KCB36749.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
lipoprotein
L1_008_000G1_scaffold_845_13
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9924..11309
DNA (1386bp) protein (462aa)
P-type conjugative transfer protein TrbL n=1 Tax=Xanthomonas citri pv. mangiferaeindicae LMG 941 RepID=H8FI58_XANCI
P-type conjugative transfer protein TrbL {ECO:0000313|EMBL:CCG38045.1}; TaxID=1156940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. mangiferaeindicae LMG 941.;"
conjugal transfer protein TrbL
L1_008_000G1_scaffold_845_14
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11322..12026
DNA (705bp) protein (235aa)
Conjugal transfer family protein n=1 Tax=Xanthomonas citri pv. mangiferaeindicae LMG 941 RepID=H8FI57_XANCI
Conjugal transfer family protein {ECO:0000313|EMBL:CCG38044.1}; TaxID=1156940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. mangiferaeindicae LMG 941.;"
conjugal transfer protein TrbF
L1_008_000G1_scaffold_845_15
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12023..13012
DNA (990bp) protein (330aa)
P-type conjugative transfer protein TrbG n=1 Tax=Xanthomonas citri pv. mangiferaeindicae LMG 941 RepID=H8FI56_XANCI
conjugative transfer protein TrbG
Conjugative transfer protein TrbG {ECO:0000313|EMBL:AKA21956.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis.;"
L1_008_000G1_scaffold_845_16
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13015..14307
DNA (1293bp) protein (431aa)
Bacterial conjugation TrbI-like family protein n=1 Tax=Xanthomonas citri pv. mangiferaeindicae LMG 941 RepID=H8FI55_XANCI
Conjugation TrbI-like protein {ECO:0000313|EMBL:KCB35625.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
conjugative transfer protein TrbI
L1_008_000G1_scaffold_845_17
Shewanella sp. ANA-3, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14304..14549
DNA (246bp) protein (82aa)
Uncharacterized protein n=5 Tax=Proteobacteria RepID=A0KUQ7_SHESA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK47526.1}; TaxID=94122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. (strain ANA-3).;"
L1_008_000G1_scaffold_845_18
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14673..15413)
DNA (741bp) protein (247aa)
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Cronobacter condimenti 1330 RepID=K8ADV7_9ENTR
Oxidoreductase {ECO:0000313|EMBL:EWY40995.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
short-chain dehydrogenase/reductase SDR
L1_008_000G1_scaffold_845_19
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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15503..16057
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Xanthomonas arboricola RepID=UPI0002E5644F
TetR family transcriptional regulator {ECO:0000313|EMBL:EWY40996.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
TetR family transcriptional regulator
L1_008_000G1_scaffold_845_20
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16265..17206)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Thalassospira lucentensis RepID=UPI0003B42AD1
Uncharacterized protein {ECO:0000313|EMBL:KDE91912.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
hypothetical protein
L1_008_000G1_scaffold_845_21
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17326..18273
DNA (948bp) protein (316aa)
LysR family transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CBC9F
LysR family transcriptional regulator {ECO:0000313|EMBL:KDE91913.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
LysR family transcriptional regulator
L1_008_000G1_scaffold_845_22
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18809..19156
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FSU6_STRMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJP80699.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
L1_008_000G1_scaffold_845_23
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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19268..19744
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3DY20_STEMA
Chemotaxis protein CheW {ECO:0000313|EMBL:EZP45694.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
cheW; chemotaxis protein CheW
L1_008_000G1_scaffold_845_24
unknown

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20135..20413
DNA (279bp) protein (93aa)

This feature has no annotations

L1_008_000G1_scaffold_845_25
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20626..21741)
DNA (1116bp) protein (372aa)
methyl-accepting chemotaxis protein, partial n=1 Tax=Xanthomonas sacchari RepID=UPI0002630338
chemotaxis protein
Chemotaxis protein {ECO:0000313|EMBL:AJC44651.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
L1_008_000G1_scaffold_845_26
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21741..22853)
DNA (1113bp) protein (371aa)
Chemotaxis protein n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D1D4_STEMA
Chemotaxis protein {ECO:0000313|EMBL:CCP17195.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
methyl-accepting chemotaxis receptor
L1_008_000G1_scaffold_845_27
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22853..23194)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003703BE1
Putative uncharacterized protein {ECO:0000313|EMBL:EED41229.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
L1_008_000G1_scaffold_845_28
unknown

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comp(23309..23692)
DNA (384bp) protein (128aa)

This feature has no annotations

L1_008_000G1_scaffold_845_29
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23753..24181)
DNA (429bp) protein (143aa)
Photoactivated adenylate cyclase subunit beta {ECO:0000313|EMBL:CCP17196.1}; EC=4.6.1.1 {ECO:0000313|EMBL:CCP17196.1};; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
Photoactivated adenylate cyclase subunit beta n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5CZY7_STEMA
BLUF domain containing protein
L1_008_000G1_scaffold_845_30
unknown

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comp(24243..24518)
DNA (276bp) protein (92aa)

This feature has no annotations

Displaying items 1-30 of 41 in total

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