ggKbase home page

L1_008_000G1_scaffold_2290

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_2290_1
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..406)
DNA (405bp) protein (135aa)
Regulatory protein vanR n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HTP2_9CLOT
Regulatory protein vanR {ECO:0000313|EMBL:EHE95205.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
OmpR family two-component response regulator
L1_008_000G1_scaffold_2290_2
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(573..2186)
DNA (1614bp) protein (538aa)
Transposase IS66 n=2 Tax=Clostridium sp. D5 RepID=F0Z5X3_9CLOT
Transposase IS66 {ECO:0000313|EMBL:EGB90536.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Transposase IS66 family.
L1_008_000G1_scaffold_2290_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2453..2809)
DNA (357bp) protein (119aa)
IS66 family element, Orf2 n=1 Tax=Clostridium sp. D5 RepID=F0Z5X4_9CLOT
IS66 family element, Orf2 {ECO:0000313|EMBL:EGB90537.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Transposase and inactivated derivatives
L1_008_000G1_scaffold_2290_4
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2799..3182)
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0Z5X5_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB90538.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_008_000G1_scaffold_2290_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3416..3832)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XH58_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY95248.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
L1_008_000G1_scaffold_2290_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3906..4529)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XI15_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY95246.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L1_008_000G1_scaffold_2290_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4560..5312)
DNA (753bp) protein (251aa)
Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family (EC:3.1.3.25)
Inositol monophosphatase family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AKC5_9CLOT
Inositol monophosphatase family protein {ECO:0000313|EMBL:EFC97739.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L1_008_000G1_scaffold_2290_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5404..5787)
DNA (384bp) protein (128aa)
Acetyltransferase, GNAT family n=7 Tax=Clostridium difficile RepID=D5Q1G0_CLODI
Putative acyl-CoA N-acyltransferase {ECO:0000313|EMBL:CCL00928.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
putative acyl-CoA N-acyltransferase
L1_008_000G1_scaffold_2290_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5806..6243)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XI10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY95241.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Acetyltransferase (GNAT) family.
L1_008_000G1_scaffold_2290_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6387..6851)
DNA (465bp) protein (155aa)
Glyoxalase n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9XQX5_9CLOT
Glyoxalase {ECO:0000313|EMBL:ENZ17610.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
glyoxalase
L1_008_000G1_scaffold_2290_11
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6887..7438)
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=E9SQS1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03238.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_000G1_scaffold_2290_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7570..8163)
DNA (594bp) protein (198aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=N9X9K2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ11986.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
nuclease
L1_008_000G1_scaffold_2290_13
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8153..9478)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JYP9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB62921.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
phosphoadenosine phosphosulfate reductase
L1_008_000G1_scaffold_2290_14
unknown

Not on your lists

comp(9819..10004)
DNA (186bp) protein (62aa)

This feature has no annotations

L1_008_000G1_scaffold_2290_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10169..11362
DNA (1194bp) protein (398aa)
thermostable carboxypeptidase 2 (EC:3.4.17.-)
Amidohydrolase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBX2_9CLOT
Amidohydrolase {ECO:0000313|EMBL:EKY25464.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Displaying 15 items

View Taxonomy