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L1_008_000G1_scaffold_1043

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_1043_1
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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896..2242
DNA (1347bp) protein (449aa)
Serine proteinase inhibitor n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQ98_9FIRM
Serine proteinase inhibitor {ECO:0000313|EMBL:EEQ60192.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
proteinase inhibitor I4 serpin
L1_008_000G1_scaffold_1043_2
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2360..3250
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQ99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60193.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_1043_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3305..4282
DNA (978bp) protein (326aa)
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EEQ60194.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEQ60194.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
DNA polymerase III, delta subunit n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQA0_9FIRM
DNA polymerase III subunit delta
L1_008_000G1_scaffold_1043_4
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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4300..4872
DNA (573bp) protein (191aa)
UPF0340 protein CBFG_03907 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQA1_9FIRM
UPF0340 protein CBFG_03907 {ECO:0000256|HAMAP-Rule:MF_00800}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
conserved hypothetical protein TIGR01440
L1_008_000G1_scaffold_1043_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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4901..5485
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60196.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_1043_6
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5682..5825)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60197.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L1_008_000G1_scaffold_1043_7
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5878..6075)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60198.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_1043_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6081..6857)
DNA (777bp) protein (259aa)
DNA-binding protein IolR n=2 Tax=Clostridium botulinum B RepID=B2TJ83_CLOBB
DNA-binding protein IolR
DNA-binding protein IolR {ECO:0000313|EMBL:ACD24159.1}; DeoR-family transcriptional regulator {ECO:0000313|EMBL:CDH90216.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L1_008_000G1_scaffold_1043_9
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(6878..7642)
DNA (765bp) protein (255aa)
DeoR family transcriptional regulator n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EL51_CLOPA
iolR; HTH-type transcriptional regulator IolR
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ACZ10852.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 / NCTC 11300).;"
L1_008_000G1_scaffold_1043_10
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8088..9599
DNA (1512bp) protein (504aa)
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R1F4_CLOSW
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KEZ87836.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
methylmalonate-semialdehyde dehydrogenase
L1_008_000G1_scaffold_1043_11
Anaerostipes sp. 3_2_56FAA, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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9616..10632
DNA (1017bp) protein (339aa)
5-dehydro-2-deoxygluconokinase {ECO:0000256|HAMAP-Rule:MF_01668}; EC=2.7.1.92 {ECO:0000256|HAMAP-Rule:MF_01668};; 2-deoxy-5-keto-D-gluconate kinase {ECO:0000256|HAMAP-Rule:MF_01668}; TaxID=665937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes sp. 3_2_56FAA.;"
5-dehydro-2-deoxygluconokinase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V4H1_CLOPF
myo-inositol catabolism protein IolC
L1_008_000G1_scaffold_1043_12
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10646..11470
DNA (825bp) protein (275aa)
Ketose-bisphosphate aldolase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C4C0_9CLOT
Ketose-bisphosphate aldolase {ECO:0000313|EMBL:EEG72913.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
ketose-bisphosphate aldolase
L1_008_000G1_scaffold_1043_13
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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11502..12263
DNA (762bp) protein (254aa)
3-oxoacyl-(Acyl-carrier protein) reductase id=2648798 bin=GWA1_Treponema_62_8 species=Robiginitalea biformata genus=Robiginitalea taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
dehydrogenase
Dehydrogenase {ECO:0000313|EMBL:EAR01113.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter.;" source="Maribacter sp. (strain HTCC2170 / KCCM 42371).;"
L1_008_000G1_scaffold_1043_14
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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12282..13523
DNA (1242bp) protein (414aa)
Ligand-binding protein, receptor family n=2 Tax=Oscillibacter RepID=U2QKS9_9FIRM
Ligand-binding protein, receptor family {ECO:0000313|EMBL:ERK58666.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
branched subunit amino acid ABC transporter ATP-binding protein
L1_008_000G1_scaffold_1043_15
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13754..14626
DNA (873bp) protein (291aa)
Putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH n=2 Tax=Oscillibacter RepID=U2RTE8_9FIRM
Putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH {ECO:0000313|EMBL:ERK58667.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
inner-membrane translocator
L1_008_000G1_scaffold_1043_16
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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14651..15622
DNA (972bp) protein (324aa)
Branched-chain amino acid ABC transporter, permease protein n=2 Tax=Oscillibacter RepID=U2RYQ5_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:ERK58668.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
amino acid/amide ABC transporter membrane protein 2, HAAT family, amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
L1_008_000G1_scaffold_1043_17
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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15609..16376
DNA (768bp) protein (256aa)
ABC transporter, ATP-binding protein n=2 Tax=Oscillibacter RepID=U2QK07_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERK58669.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
branched-chain amino acid ABC transporter ATP-binding protein
L1_008_000G1_scaffold_1043_18
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16363..17088
DNA (726bp) protein (242aa)
ABC transporter, ATP-binding protein n=2 Tax=Oscillibacter RepID=U2Q253_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERK58670.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
amino acid ABC transporter ATP-binding protein
L1_008_000G1_scaffold_1043_19
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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17102..17932
DNA (831bp) protein (277aa)
Xylose isomerase domain-containing protein TIM barrel n=5 Tax=Pelosinus fermentans RepID=I8RKF6_9FIRM
Xylose isomerase domain-containing protein TIM barrel
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AIF50789.1}; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. UFO1.;"
L1_008_000G1_scaffold_1043_20
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18041..18304)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HSG4_9CLOT
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
30S ribosomal protein S20
L1_008_000G1_scaffold_1043_21
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18608..19618
DNA (1011bp) protein (337aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
spore protease (EC:3.4.24.78)
Germination protease n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQB1_9FIRM
L1_008_000G1_scaffold_1043_22
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19823..21103
DNA (1281bp) protein (427aa)
Stage II sporulation protein P (SpoIIP) n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQB3_9FIRM
Stage II sporulation protein P (SpoIIP) {ECO:0000313|EMBL:EEQ60207.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Stage II sporulation P family protein
L1_008_000G1_scaffold_1043_23
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21051..23087
DNA (2037bp) protein (679aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Elongation factor 4 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQB4_9FIRM
GTP-binding protein LepA
L1_008_000G1_scaffold_1043_24
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23194..24384
DNA (1191bp) protein (397aa)
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EEQ60209.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EEQ60209.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQB5_9FIRM
oxygen-independent coproporphyrinogen III oxidase
L1_008_000G1_scaffold_1043_25
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24501..25244
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60210.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
Displaying 25 items

View Taxonomy