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L1_008_000G1_scaffold_1102

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Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_1102_1
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..502)
DNA (501bp) protein (167aa)
Glucarate dehydratase {ECO:0000313|EMBL:EEQ62215.1}; EC=4.2.1.40 {ECO:0000313|EMBL:EEQ62215.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
D-glucarate dehydratase (EC:4.2.1.40)
Glucarate dehydratase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVR2_9FIRM
L1_008_000G1_scaffold_1102_2
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

698..1630
DNA (933bp) protein (311aa)
LysR substrate binding domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVR1_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EEQ62214.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
DNA-binding transcriptional regulator cynR
L1_008_000G1_scaffold_1102_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1763..3712)
DNA (1950bp) protein (650aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVR0_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EEQ62213.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
diguanylate cyclase
L1_008_000G1_scaffold_1102_4
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3705..5129)
DNA (1425bp) protein (475aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVQ9_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEQ62212.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
carbohydrate ABC transporter substrate-binding protein
L1_008_000G1_scaffold_1102_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5472..6719)
DNA (1248bp) protein (416aa)
Cell wall-binding repeat protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVQ6_9FIRM
Cell wall-binding repeat protein {ECO:0000313|EMBL:EEQ62209.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
cell wall binding repeat-containing protein
L1_008_000G1_scaffold_1102_6
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6992..7528)
DNA (537bp) protein (179aa)
50S ribosomal protein L17 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVQ5_9FIRM
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
50S ribosomal protein L17
L1_008_000G1_scaffold_1102_7
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7684..8646)
DNA (963bp) protein (321aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
DNA-directed RNA polymerase subunit alpha n=2 Tax=Clostridiales RepID=C5EVQ4_9FIRM
DNA-directed RNA polymerase subunit alpha
L1_008_000G1_scaffold_1102_8
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(8812..9405)
DNA (594bp) protein (198aa)
30S ribosomal protein S4 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVQ3_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
SSU ribosomal protein S4P
L1_008_000G1_scaffold_1102_9
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9431..9832)
DNA (402bp) protein (134aa)
30S ribosomal protein S11 n=2 Tax=Clostridiales RepID=C5EVQ2_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
30S ribosomal protein S11
L1_008_000G1_scaffold_1102_10
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10012..10380)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVQ1_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
30S ribosomal protein S13
L1_008_000G1_scaffold_1102_11
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10699..10917)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVQ0_9FIRM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
translation initiation factor IF-1
L1_008_000G1_scaffold_1102_12
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10932..11195)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ62202.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_1102_13
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11209..11955)
DNA (747bp) protein (249aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVP8_9FIRM
L1_008_000G1_scaffold_1102_14
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11959..12603)
DNA (645bp) protein (215aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVP7_9FIRM
L1_008_000G1_scaffold_1102_15
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12703..14019)
DNA (1317bp) protein (439aa)
Protein translocase subunit SecY n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVP6_9FIRM
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
preprotein translocase subunit SecY
L1_008_000G1_scaffold_1102_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14019..14459)
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVP5_9FIRM
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
50S ribosomal protein L15
L1_008_000G1_scaffold_1102_17
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14485..14667)
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVP4_9FIRM
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
50S ribosomal protein L30
L1_008_000G1_scaffold_1102_18
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14683..15192)
DNA (510bp) protein (170aa)
30S ribosomal protein S5 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVP3_9FIRM
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
SSU ribosomal protein S5P
L1_008_000G1_scaffold_1102_19
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15208..15576)
DNA (369bp) protein (123aa)
50S ribosomal protein L18 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVP2_9FIRM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
50S ribosomal protein L18
L1_008_000G1_scaffold_1102_20
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15594..16136)
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVP1_9FIRM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
LSU ribosomal protein L6P
L1_008_000G1_scaffold_1102_21
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16307..16708)
DNA (402bp) protein (134aa)
30S ribosomal protein S8 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVP0_9FIRM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
30S ribosomal protein S8
L1_008_000G1_scaffold_1102_22
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16740..16925)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=3 Tax=Clostridiales RepID=C5EVN9_9FIRM
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
30S ribosomal protein S14
L1_008_000G1_scaffold_1102_23
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16943..17482)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=2 Tax=Clostridiales RepID=C5EVN8_9FIRM
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
50S ribosomal protein L5
L1_008_000G1_scaffold_1102_24
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17506..17811)
DNA (306bp) protein (102aa)
50S ribosomal protein L24 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVN7_9FIRM
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
LSU ribosomal protein L24P
L1_008_000G1_scaffold_1102_25
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17825..18193)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVN6_9FIRM
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
50S ribosomal protein L14
L1_008_000G1_scaffold_1102_26
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18219..18491)
DNA (273bp) protein (91aa)
30S ribosomal protein S17 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVN5_9FIRM
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
30S ribosomal protein S17
L1_008_000G1_scaffold_1102_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18491..18694)
DNA (204bp) protein (68aa)
50S ribosomal protein L29 n=17 Tax=Clostridium RepID=A8S1F6_9CLOT
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
50S ribosomal protein L29
L1_008_000G1_scaffold_1102_28
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18684..19121)
DNA (438bp) protein (146aa)
50S ribosomal protein L16 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVN3_9FIRM
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
LSU ribosomal protein L16P
L1_008_000G1_scaffold_1102_29
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19121..19777)
DNA (657bp) protein (219aa)
30S ribosomal protein S3 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVN2_9FIRM
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
30S ribosomal protein S3
L1_008_000G1_scaffold_1102_30
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19787..20173)
DNA (387bp) protein (129aa)
50S ribosomal protein L22 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVN1_9FIRM
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
50S ribosomal protein L22
Displaying items 1-30 of 36 in total

View Taxonomy