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L1_008_000G1_scaffold_1207

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_1207_1
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(334..810)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60374.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_1207_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(807..1934)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RZB2_9CLOT
Ribose ABC transporter permease {ECO:0000313|EMBL:ENZ15603.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
permease component of ribose/xylose/arabinose/galactoside ABC-type transporters
L1_008_000G1_scaffold_1207_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1931..3010)
DNA (1080bp) protein (360aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQS8_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEQ60372.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
permease component of ribose/xylose/arabinose/galactoside ABC-type transporters
L1_008_000G1_scaffold_1207_4
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3023..4660)
DNA (1638bp) protein (546aa)
Putative sugar ABC transporter, ATP binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQS7_9FIRM
Putative sugar ABC transporter, ATP binding protein {ECO:0000313|EMBL:EEQ60371.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
sugar ABC transporter ATPase
L1_008_000G1_scaffold_1207_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4691..5983)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60370.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_1207_6
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6128..7651)
DNA (1524bp) protein (508aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQS5_9FIRM
integral membrane sensor signal transduction histidine kinase
L1_008_000G1_scaffold_1207_7
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7648..8328)
DNA (681bp) protein (227aa)
Transcriptional regulatory protein ResD n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQS4_9FIRM
Transcriptional regulatory protein ResD {ECO:0000313|EMBL:EEQ60368.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
winged helix family two component transcriptional regulator
L1_008_000G1_scaffold_1207_8
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8490..8819)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60367.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Protein of unknown function (DUF1292).
L1_008_000G1_scaffold_1207_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8914..9450)
DNA (537bp) protein (179aa)
ATP:corrinoid adenosyltransferase (EC:2.5.1.17)
Putative cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQS2_9FIRM
Putative cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:EEQ60366.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L1_008_000G1_scaffold_1207_10
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9447..11222)
DNA (1776bp) protein (592aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
UvrD/REP helicase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQS1_9FIRM
UvrD/REP helicase
L1_008_000G1_scaffold_1207_11
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11263..12720)
DNA (1458bp) protein (486aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQS0_9FIRM
L1_008_000G1_scaffold_1207_12
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12886..13587)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60363.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L1_008_000G1_scaffold_1207_13
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13629..15749)
DNA (2121bp) protein (707aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQR8_9FIRM
L1_008_000G1_scaffold_1207_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16028..16294)
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=19 Tax=Clostridiales RepID=A8RZ95_9CLOT
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
SSU ribosomal protein S15P
L1_008_000G1_scaffold_1207_15
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16487..17440)
DNA (954bp) protein (318aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Riboflavin biosynthesis protein RibF n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQR6_9FIRM
riboflavin biosynthesis protein RibF
L1_008_000G1_scaffold_1207_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17488..18423)
DNA (936bp) protein (312aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
tRNA pseudouridine synthase B (EC:4.2.1.70 5.4.99.12)
tRNA pseudouridine synthase B n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQR5_9FIRM
L1_008_000G1_scaffold_1207_17
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18460..19410)
DNA (951bp) protein (317aa)
DHHA1 domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQR4_9FIRM
DHHA1 domain protein {ECO:0000313|EMBL:EEQ60358.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Exopolyphosphatase-related proteins
L1_008_000G1_scaffold_1207_18
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19410..19811)
DNA (402bp) protein (134aa)
Ribosome-binding factor A n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQR3_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ribosome-binding factor A
L1_008_000G1_scaffold_1207_19
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19923..22178)
DNA (2256bp) protein (752aa)
Translation initiation factor IF-2 (Fragment) n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HS46_9CLOT
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
translation initiation factor IF-2
Displaying 19 items

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