ggKbase home page

L1_008_000G1_scaffold_1273

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_1273_1
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(376..1716)
DNA (1341bp) protein (447aa)
uxaB; Altronate oxidoreductase (EC:1.1.1.58)
Mannitol dehydrogenase domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EW18_9FIRM
Mannitol dehydrogenase domain protein {ECO:0000313|EMBL:EEQ62076.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L1_008_000G1_scaffold_1273_2
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2160..2534)
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EW17_9FIRM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
LSU ribosomal protein L12P
L1_008_000G1_scaffold_1273_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2697..3197)
DNA (501bp) protein (167aa)
50S ribosomal protein L10 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EW16_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
LSU ribosomal protein L10P
L1_008_000G1_scaffold_1273_4
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3490..4185)
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EW15_9FIRM
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
50S ribosomal protein L1
L1_008_000G1_scaffold_1273_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4374..4799)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EW14_9FIRM
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
50S ribosomal protein L11
L1_008_000G1_scaffold_1273_6
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4897..5415)
DNA (519bp) protein (173aa)
Transcription termination/antitermination protein NusG n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EW13_9FIRM
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
NusG antitermination factor
L1_008_000G1_scaffold_1273_7
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5464..5724)
DNA (261bp) protein (87aa)
Protein translocase subunit SecE n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HRW5_9CLOT
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Preprotein translocase subunit SecE
L1_008_000G1_scaffold_1273_8
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5751..5900)
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=3 Tax=Clostridiales RepID=C5EW11_9FIRM
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
50S ribosomal protein L33
L1_008_000G1_scaffold_1273_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6142..7851)
DNA (1710bp) protein (570aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EW10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ62068.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L1_008_000G1_scaffold_1273_10
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7958..8683)
DNA (726bp) protein (242aa)
ComF family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EW08_9FIRM
ComF family protein {ECO:0000313|EMBL:EEQ62066.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
phosphoribosyltransferase
L1_008_000G1_scaffold_1273_11
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9564..10385)
DNA (822bp) protein (274aa)
Ketose-bisphosphate aldolase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EW05_9FIRM
Ketose-bisphosphate aldolase {ECO:0000313|EMBL:EEQ62063.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ketose-bisphosphate aldolase
L1_008_000G1_scaffold_1273_12
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10404..11453)
DNA (1050bp) protein (350aa)
Phosphotransferase system, EIIC n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EW04_9FIRM
Phosphotransferase system, EIIC {ECO:0000313|EMBL:EEQ62062.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
PTS system, fructose specific enzyme IIC component
L1_008_000G1_scaffold_1273_13
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11612..11929)
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VWY5_9FIRM
PTS system, Fru family, IIB component {ECO:0000313|EMBL:ENY89195.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
PTS system IIB component, Fru family
L1_008_000G1_scaffold_1273_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11959..12441)
DNA (483bp) protein (161aa)
PTS system, fructose subfamily, IIA component n=2 Tax=Clostridium bolteae RepID=R0ARM1_9CLOT
PTS system, fructose subfamily, IIA component {ECO:0000313|EMBL:ENZ47354.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
PTS system, fructose specific enzyme IIA component
L1_008_000G1_scaffold_1273_15
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12459..14468)
DNA (2010bp) protein (670aa)
transcriptional antiterminator BglG (EC:2.7.1.69)
PRD domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EW03_9FIRM
PRD domain protein {ECO:0000313|EMBL:EEQ62061.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L1_008_000G1_scaffold_1273_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14677..15552)
DNA (876bp) protein (292aa)
Phosphogluconate dehydrogenase (Decarboxylating), NAD binding domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EW02_9FIRM
Phosphogluconate dehydrogenase (Decarboxylating), NAD binding domain protein {ECO:0000313|EMBL:EEQ62060.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
2-hydroxy-3-oxopropionate reductase
L1_008_000G1_scaffold_1273_17
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15840..18221)
DNA (2382bp) protein (794aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
helicase, putative, RecD/TraA family (EC:3.1.11.5)
Helicase, RecD/TraA family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EW00_9FIRM
L1_008_000G1_scaffold_1273_18
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18272..19312)
DNA (1041bp) protein (347aa)
Rod shape-determining protein MreB n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVZ9_9FIRM
Rod shape-determining protein MreB {ECO:0000313|EMBL:EEQ62057.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
rod shape-determining protein MreB
L1_008_000G1_scaffold_1273_19
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19909..20745
DNA (837bp) protein (279aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVZ7_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEQ62055.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
integrase family protein
Displaying 19 items

View Taxonomy