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L1_008_000G1_scaffold_169

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_169_1
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..588)
-----------------
DNA (588bp)
protein (196aa)
gyaR; glyoxylate reductase GyaR (EC:1.1.1.26)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TBS7_9CLOT
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding {ECO:0000313|EMBL:EGD48098.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
L1_008_000G1_scaffold_169_2
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(594..1814)
-----------------
DNA (1221bp)
protein (407aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6EHE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB00003.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
cyanate permease
L1_008_000G1_scaffold_169_3
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1841..2986)
-----------------
DNA (1146bp)
protein (382aa)
alcohol dehydrogenase, class IV (EC:1.1.1.1)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30786.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_008_000G1_scaffold_169_4
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3006..3644)
-----------------
DNA (639bp)
protein (213aa)
ulaF2; L-ribulose-5-phosphate 4-epimerase UlaF (EC:5.1.3.4)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30787.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_008_000G1_scaffold_169_5
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3842..5791
-----------------
DNA (1950bp)
protein (650aa)
Transcriptional antiterminator, BglG family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MV27_9CLOT
transcriptional antiterminator, BglG family
Transcriptional antiterminator, BglG family {ECO:0000313|EMBL:AGF58516.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L1_008_000G1_scaffold_169_6
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5870..7171)
-----------------
DNA (1302bp)
protein (434aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WVS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08161.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
ProP; major facilitator superfamily permease
L1_008_000G1_scaffold_169_7
unknown

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comp(7311..8153)
-----------------
DNA (843bp)
protein (281aa)

This feature has no annotations

L1_008_000G1_scaffold_169_8
Clostridium sp. SY8519, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8184..9431)
-----------------
DNA (1248bp)
protein (416aa)
Sugar phosphate permease n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V487_CLOSS
UhpC; sugar phosphate permease
Sugar phosphate permease {ECO:0000313|EMBL:BAK47566.1}; TaxID=1042156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain SY8519).;"
L1_008_000G1_scaffold_169_9
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9653..10333
-----------------
DNA (681bp)
protein (227aa)
Putative uncharacterized protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TBT5_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGD48106.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
hypothetical protein
L1_008_000G1_scaffold_169_10
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10478..11260)
-----------------
DNA (783bp)
protein (261aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EEQ57690.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EEQ57690.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHK5_9FIRM
cell wall hydrolase/autolysin
L1_008_000G1_scaffold_169_11
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11326..11766)
-----------------
DNA (441bp)
protein (147aa)
Transcriptional regulator, AsnC family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHK6_9FIRM
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EEQ57691.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
transcriptional regulator, AsnC family
L1_008_000G1_scaffold_169_12
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11793..13013)
-----------------
DNA (1221bp)
protein (407aa)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
LL-diaminopimelate aminotransferase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHK7_9FIRM
L,L-diaminopimelate aminotransferase
L1_008_000G1_scaffold_169_13
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13266..14096)
-----------------
DNA (831bp)
protein (277aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHK8_9FIRM
L1_008_000G1_scaffold_169_14
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14106..14654)
-----------------
DNA (549bp)
protein (183aa)
ANTAR domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHK9_9FIRM
ANTAR domain protein {ECO:0000313|EMBL:EEQ57694.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ANTAR domain-containing protein
L1_008_000G1_scaffold_169_15
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14708..16045)
-----------------
DNA (1338bp)
protein (446aa)
Glutamine synthetase, type I {ECO:0000313|EMBL:EEQ57695.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EEQ57695.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Glutamine synthetase, type I n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHL0_9FIRM
glutamine synthetase, type I
L1_008_000G1_scaffold_169_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16209..17069)
-----------------
DNA (861bp)
protein (287aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Diaminopimelate epimerase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHL1_9FIRM
diaminopimelate epimerase
L1_008_000G1_scaffold_169_17
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17317..18195
-----------------
DNA (879bp)
protein (293aa)
AraC-like ligand binding domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHL2_9FIRM
AraC-like ligand binding domain protein {ECO:0000313|EMBL:EEQ57697.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
AraC-type DNA-binding domain-containing proteins
L1_008_000G1_scaffold_169_18
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18349..19509
-----------------
DNA (1161bp)
protein (387aa)
Receptor family ligand-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHL3_9FIRM
Receptor family ligand-binding protein {ECO:0000313|EMBL:EEQ57698.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
extracellular ligand-binding receptor
L1_008_000G1_scaffold_169_19
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19662..20543
-----------------
DNA (882bp)
protein (294aa)
Putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHL4_9FIRM
Putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH {ECO:0000313|EMBL:EEQ57699.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
inner-membrane translocator
L1_008_000G1_scaffold_169_20
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20554..21669
-----------------
DNA (1116bp)
protein (372aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHL5_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEQ57700.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
inner-membrane translocator
L1_008_000G1_scaffold_169_21
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21669..22523
-----------------
DNA (855bp)
protein (285aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHL6_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEQ57701.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ABC transporter
L1_008_000G1_scaffold_169_22
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22510..23217
-----------------
DNA (708bp)
protein (236aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHL7_9FIRM
High-affinity branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:KJJ72437.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
ABC transporter
L1_008_000G1_scaffold_169_23
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23459..24055
-----------------
DNA (597bp)
protein (199aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ57704.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L1_008_000G1_scaffold_169_24
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24126..24815)
-----------------
DNA (690bp)
protein (230aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ57705.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_169_25
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24934..25851)
-----------------
DNA (918bp)
protein (306aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHM6_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEQ57707.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
inner-membrane translocator
L1_008_000G1_scaffold_169_26
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25856..26920)
-----------------
DNA (1065bp)
protein (355aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHM7_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEQ57708.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
inner-membrane translocator
L1_008_000G1_scaffold_169_27
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26924..28444)
-----------------
DNA (1521bp)
protein (507aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHM8_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEQ57709.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ABC transporter
L1_008_000G1_scaffold_169_28
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28535..29641)
-----------------
DNA (1107bp)
protein (369aa)
Basic membrane protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHL8_9FIRM
Basic membrane protein {ECO:0000313|EMBL:EEQ57711.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
basic membrane lipoprotein
L1_008_000G1_scaffold_169_29
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29858..30622)
-----------------
DNA (765bp)
protein (255aa)
Response regulator receiver domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHL9_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEQ57712.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
AraC family transcriptional regulator
L1_008_000G1_scaffold_169_30
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30619..32412)
-----------------
DNA (1794bp)
protein (598aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHM0_9FIRM
integral membrane sensor signal transduction histidine kinase
Displaying items 1-30 of 96 in total

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